RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CHRM5P08912 532 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 CR2P20023 1033 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 SLC19A1P41440 591 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 RPS5P46782 204 aaKnown RBP7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 GZMKP49863 264 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 CDH12P55289 794 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 CLDN8P56748 225 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 ARF5P84085 180 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 NFATC2Q13469 925 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 TAB1Q15750 504 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 CHRNA6Q15825 494 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 TRIM60Q495X7 471 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 BRAT1Q6PJG6 821 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 ANKS3Q6ZW76 656 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 C16orf62Q7Z3J2 963 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 HDDC2Q7Z4H3 204 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 PRSS42Q7Z5A4 293 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 ZNF605Q86T29 641 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 GPR156Q8NFN8 814 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 OR4M2Q8NGB6 313 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 OR8H1Q8NGG4 311 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 NELL1Q92832 810 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 GTPBP3Q969Y2 492 aaKnown RBP7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 ZNF578Q96N58 590 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 NECTIN4Q96NY8 510 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 RSPH9Q9H1X1 276 aaPredicted RBP7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 PCDHB1Q9Y5F3 818 aa7.94□□□□□ -1.14
CDC42SE1-201ENST00000357235 PLXNB2O15031 1838 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 M0R082 166 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 SUV39H1O43463 412 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 CLDN11O75508 207 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 OAZ2O95190 189 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 PTHP01270 115 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 KLKB1P03952 638 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 HIST1H2AGP0C0S8 130 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 AKR1A1P14550 325 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TNNI3P19429 210 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 HIST1H2ADP20671 130 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 CRATP43155 626 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 ST3GAL4Q11206 333 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 PTCHD3Q3KNS1 767 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 SPRYD7Q5W111 196 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TYW3Q6IPR3 259 aaKnown RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 UBE2R2Q712K3 238 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TRIM46Q7Z4K8 759 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 SERINC5Q86VE9 423 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 CALHM3Q86XJ0 350 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 ZBTB44Q8NCP5 570 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 FANK1Q8TC84 345 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 UBASH3BQ8TF42 649 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 APH1BQ8WW43 257 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 AKAP1Q92667 903 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 HIST1H2AHQ96KK5 128 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 UROC1Q96N76 676 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 SECISBP2Q96T21 854 aaKnown RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 HIST1H2AJQ99878 128 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 H2AFJQ9BTM1 129 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 CDADC1Q9BWV3 514 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TNKS2Q9H2K2 1166 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 IL26Q9NPH9 171 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TMEM184CQ9NVA4 438 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 RLIMQ9NVW2 624 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TMEM45AQ9NWC5 275 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 DUSP12Q9UNI6 340 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 MRPS7Q9Y2R9 242 aaKnown RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 PCDHGA6Q9Y5G7 932 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 PEX16Q9Y5Y5 336 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 A3GALT2U3KPV4 340 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TRBV5-3A0A0A0MS03 114 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 MTMR11A4FU01 709 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 LINC00862A6NCI5 91 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 CLDN24A6NM45 220 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TNFRSF11BO00300 401 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 GFRA2O00451 464 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 DSCR3O14972 297 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 OR5F1O95221 314 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 KCNK5O95279 499 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 GBAP04062 536 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 CCNYL3P0C7X3 344 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 ACVR2AP27037 513 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 CSTF2P33240 577 aaKnown RBP eCLIP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 HMGCLP35914 325 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 CXCR4P61073 352 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 SPIBQ01892 262 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 SCRN3Q0VDG4 424 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TAF1CQ15572 869 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 PRSS55Q6UWB4 352 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 KIAA1324Q6UXG2 1013 aaKnown RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 RSPO2Q6UXX9 243 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 HS6ST3Q8IZP7 471 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 SLC5A8Q8N695 610 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 IPCEF1Q8WWN9 437 aaPredicted RBP7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 MYDGFQ969H8 173 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 COPS8Q99627 209 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 IER2Q9BTL4 223 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 TPT1P8Q9HAU6 139 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 EVA1BQ9NVM1 165 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 FZD4Q9ULV1 537 aa7.93□□□□□ -1.14
CDC42SE1-201ENST00000357235 FNDC1Q4ZHG4 1894 aaPredicted RBP7.92□□□□□ -1.14
CDC42SE1-201ENST00000357235 A0A0B4J203 849 aa7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms