RNA–Protein interactions for RNA: ENST00000356948.10

PTBP1-203, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene PTBP1, Length 3,598 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-203ENST00000356948 WNT6Q9Y6F9 365 aa14.65□□□□□ -0.06
PTBP1-203ENST00000356948 CKAP5Q14008 2032 aa14.65□□□□□ -0.06
PTBP1-203ENST00000356948 NOTCH4Q99466 2003 aa14.65□□□□□ -0.06
PTBP1-203ENST00000356948 M0QX08 132 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 NPC1O15118 1278 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 SCAMP2O15127 329 aaKnown RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 C8GP07360 202 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 CYP2A7P20853 494 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 RPS3AP61247 264 aaKnown RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 STARD3Q14849 445 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 GDPD4Q6W3E5 623 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 CACUL1Q86Y37 369 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 TCEAL8Q8IYN2 117 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 NFKBIDQ8NI38 313 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 OTUB1Q96FW1 271 aaPredicted RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 TSEN34Q9BSV6 310 aaKnown RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 SPATA6Q9NWH7 488 aaPredicted RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 ANKRD34BA5PLL1 514 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 STATHP02808 62 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 ZNF8P17098 575 aaPredicted RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 ARHGDIAP52565 204 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 RPS26P11Q5JNZ5 115 aaPredicted RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 SYT6Q5T7P8 510 aaPredicted RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 ATAD3BQ5T9A4 648 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 LYPLAL1Q5VWZ2 237 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 ZSWIM3Q96MP5 696 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 TCF25Q9BQ70 676 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 CFAP20Q9Y6A4 193 aaKnown RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 EFCAB9A8MZ26 197 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 RTCAO00442 366 aaKnown RBP14.64□□□□□ -0.07
PTBP1-203ENST00000356948 RGS5O15539 181 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 HOXA2O43364 376 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 SSX4O60224 188 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 PTHP01270 115 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 SPNP16150 400 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 JUNDP17535 347 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 KCNC4Q03721 635 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 GGTA1PQ4G0N0 100 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 NEK10Q6ZWH5 1172 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 ZNF558Q96NG5 402 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 COPS4Q9BT78 406 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 BEX2Q9BXY8 128 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 HS3ST2Q9Y278 367 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 LYVE1Q9Y5Y7 322 aa14.64□□□□□ -0.07
PTBP1-203ENST00000356948 ZNF106Q9H2Y7 1883 aaKnown RBP14.63□□□□□ -0.07
PTBP1-203ENST00000356948 PRAMEF33A0A0G2JMD5 474 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 OR2A25A4D2G3 310 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 PABPN1LA6NDY0 278 aaKnown RBP14.63□□□□□ -0.07
PTBP1-203ENST00000356948 PRAMEF10O60809 474 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 TSC22D2O75157 780 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 CBSLP0DN79 551 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 TYRP14679 529 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 CBSP35520 551 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 LSM11P83369 360 aaKnown RBP eCLIP14.63□□□□□ -0.079e-7■■■□□ 17.3
PTBP1-203ENST00000356948 EXOC3L2Q2M3D2 409 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 LY6G5CQ5SRR4 150 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 TMEM220Q6QAJ8 160 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 UBE2J2Q8N2K1 259 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 OR6Q1Q8NGQ2 317 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 Q96MT0 163 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 RERGLQ9H628 205 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 NEK6Q9HC98 313 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 SUV39H1O43463 412 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 C8AP07357 584 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 RNF130Q86XS8 419 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 GGHQ92820 318 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 ZNF566Q969W8 418 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 SCN3BQ9NY72 215 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 TPRKBQ9Y3C4 175 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 SNX11Q9Y5W9 270 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 CYP7B1O75881 506 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 APOA1P02647 267 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 TIMP2P16035 220 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 TGM4P49221 684 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 SLC5A12Q1EHB4 618 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 SYTL3Q4VX76 610 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 ZC3H12BQ5HYM0 836 aaKnown RBP14.63□□□□□ -0.07
PTBP1-203ENST00000356948 FAHD1Q6P587 224 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 MEX3DQ86XN8 651 aaKnown RBP14.63□□□□□ -0.07
PTBP1-203ENST00000356948 CFAP206Q8IYR0 622 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 OR8H2Q8N162 312 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 OR8J2Q8NGG1 315 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 PXYLP1Q8TE99 480 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 ING5Q8WYH8 240 aa14.63□□□□□ -0.07
PTBP1-203ENST00000356948 KIAA0100Q14667 2235 aaKnown RBP14.62□□□□□ -0.07
PTBP1-203ENST00000356948 MGAT4DA6NG13 374 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 HIDE1A8MVS5 230 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 TNFRSF11BO00300 401 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 PITPNM1O00562 1244 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 TLL1O43897 1013 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 OPRD1P41143 372 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 ST13P50502 369 aaKnown RBP14.62□□□□□ -0.07
PTBP1-203ENST00000356948 ITGA1P56199 1179 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 SPIBQ01892 262 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 PPIGQ13427 754 aaKnown RBP eCLIP14.62□□□□□ -0.072e-8■□□□□ 10.5
PTBP1-203ENST00000356948 TEAD2Q15562 447 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 HIST2H2ACQ16777 129 aaPredicted RBP14.62□□□□□ -0.07
PTBP1-203ENST00000356948 NPAS3Q8IXF0 933 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 CSGALNACT1Q8TDX6 532 aa14.62□□□□□ -0.07
PTBP1-203ENST00000356948 ZNF480Q8WV37 535 aa14.62□□□□□ -0.07
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms