RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 GPN2Q9H9Y4 310 aaPredicted RBP14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 TM7SF3Q9NS93 570 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 SCN3BQ9NY72 215 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 SNX8Q9Y5X2 465 aa14.28□□□□□ -0.12
VIPAS39-202ENST00000343765 LRRK1Q38SD2 2015 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 KRT20P35900 424 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 MVDP53602 400 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 C21orf59P57076 290 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 PCDH1Q08174 1060 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 NPRL3Q12980 569 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 SCARB2Q14108 478 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 PRAMEF14Q5SWL7 426 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 GCNT6Q5T4J0 391 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 PRAMEF13Q5VWM6 474 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 C16orf87Q6PH81 154 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 ETFBKMTQ8IXQ9 262 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 SMYD1Q8NB12 490 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 SNRNP27Q8WVK2 155 aaKnown RBP14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 ZDHHC5Q9C0B5 715 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 EPHX3Q9H6B9 360 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 TBC1D23Q9NUY8 699 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 ATAD3AQ9NVI7 634 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 ATP6V1HQ9UI12 483 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 ENPP5Q9UJA9 477 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 NDRG4Q9ULP0 352 aaKnown RBP14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 TPRKBQ9Y3C4 175 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 NAALAD2Q9Y3Q0 740 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 PCDHGA10Q9Y5H3 936 aa14.27□□□□□ -0.12
VIPAS39-202ENST00000343765 EDDM13A0A1B0GTR0 161 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 LINC01553A4QN01 128 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 TNFRSF11BO00300 401 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 RTCAO00442 366 aaKnown RBP14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 KLHL18O94889 574 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 PAPLNO95428 1278 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 VIPP01282 170 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 PCCBP05166 539 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 ELAVL3Q14576 367 aaKnown RBP14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 MAD2L1BPQ15013 274 aaPredicted RBP14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 SLC5A12Q1EHB4 618 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 AHSA2Q719I0 299 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 TSEN54Q7Z6J9 526 aaKnown RBP14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 LAS2Q8IYD9 372 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 SLC15A4Q8N697 577 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 ZNF566Q969W8 418 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 FAM129BQ96TA1 746 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 ITM2CQ9NQX7 267 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 NDUFAF4Q9P032 175 aa14.27□□□□□ -0.13
VIPAS39-202ENST00000343765 SH3PXD2BA1X283 911 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 FOXE1O00358 373 aaPredicted RBP14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 TOR1BO14657 336 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 CD6P30203 668 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 MASP1P48740 699 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 CDH12P55289 794 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 SLC35A2P78381 396 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 SPIBQ01892 262 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 FAM78AQ5JUQ0 283 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 FAM124AQ86V42 546 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 PHF6Q8IWS0 365 aaKnown RBP eCLIP14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 LRRC56Q8IYG6 542 aaPredicted RBP14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 CPA6Q8N4T0 437 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 FBXO15Q8NCQ5 510 aaPredicted RBP14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 PUM2Q8TB72 1066 aaKnown RBP eCLIP14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 BORCS5Q969J3 196 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 TAMM41Q96BW9 452 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 SPATA9Q9BWV2 254 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 MIEF1Q9NQG6 463 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 SLC23A2Q9UGH3 650 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 PNMA8BQ9ULN7 279 aaPredicted RBP14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 SLC27A6Q9Y2P4 619 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 KLHL33A6NCF5 533 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 J3KTA2 159 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 M0QX08 132 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 PCDHGA12O60330 932 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 CLPXO76031 633 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 SELENOWP63302 87 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 FPGSQ05932 587 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 E2F2Q14209 437 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 TEAD4Q15561 434 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 ZNF829Q3KNS6 432 aaPredicted RBP14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 TMEM240Q5SV17 173 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 FAHD1Q6P587 224 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 TMIGD1Q6UXZ0 262 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 OR2L2Q8NH16 312 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 CXorf40AQ8TE69 158 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 PLEKHA8Q96JA3 519 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 FEVQ99581 238 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 AMBNQ9NP70 447 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 RLIMQ9NVW2 624 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 MAPRE3Q9UPY8 281 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 CORINQ9Y5Q5 1042 aa14.26□□□□□ -0.13
VIPAS39-202ENST00000343765 TBC1D3BA6NDS4 549 aa14.25□□□□□ -0.13
VIPAS39-202ENST00000343765 TNFRSF21O75509 655 aa14.25□□□□□ -0.13
VIPAS39-202ENST00000343765 INHBBP09529 407 aa14.25□□□□□ -0.13
VIPAS39-202ENST00000343765 ACADLP28330 430 aa14.25□□□□□ -0.13
VIPAS39-202ENST00000343765 ALDH9A1P49189 494 aa14.25□□□□□ -0.13
VIPAS39-202ENST00000343765 RPS26P62854 115 aaKnown RBP14.25□□□□□ -0.13
VIPAS39-202ENST00000343765 PPIGQ13427 754 aaKnown RBP eCLIP14.25□□□□□ -0.138e-7■■■□□ 16.4
VIPAS39-202ENST00000343765 CTF1Q16619 201 aa14.25□□□□□ -0.13
VIPAS39-202ENST00000343765 FAM71E1Q6IPT2 247 aa14.25□□□□□ -0.13
VIPAS39-202ENST00000343765 VN1R5Q7Z5H4 357 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms