RNA–Protein interactions for RNA: ENST00000296271.3

RHO-201, Transcript of rhodopsin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RHO, Length 2,592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHO-201ENST00000296271 FAM227AF5H4B4 570 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 PRMT3O60678 531 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 PRKRAO75569 313 aaKnown RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 NFATC1O95644 943 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 HTR1BP28222 390 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 TPP2P29144 1249 aaPredicted RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 CD6P30203 668 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 HPCAL1P37235 193 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 ALDH9A1P49189 494 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 ELP6Q0PNE2 266 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 RPS26P11Q5JNZ5 115 aaPredicted RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 PRAMEF14Q5SWL7 426 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 PRAMEF13Q5VWM6 474 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 KDM4DQ6B0I6 523 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 GTF2IRD2BQ6EKJ0 949 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 GPR153Q6NV75 609 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 PIWIL3Q7Z3Z3 882 aaKnown RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 GTF2IRD2Q86UP8 949 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 HIPK1Q86Z02 1210 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 SLC44A2Q8IWA5 706 aaPredicted RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 KLHDC8AQ8IYD2 350 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 LAS2Q8IYD9 372 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 NLGN4XQ8N0W4 816 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 HDAC2Q92769 488 aaKnown RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 TAMM41Q96BW9 452 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 TM9SF3Q9HD45 589 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 FZD3Q9NPG1 666 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 TAAR2Q9P1P5 351 aa11.27□□□□□ -0.6
RHO-201ENST00000296271 WARS2Q9UGM6 360 aaKnown RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 NUP210Q8TEM1 1887 aaPredicted RBP11.27□□□□□ -0.6
RHO-201ENST00000296271 A0A1W2PP55 124 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 PLPP1O14494 284 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 POU2F1P14859 743 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 TGFBR1P36897 503 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 CLCNKAP51800 687 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 CDK3Q00526 305 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 MVKQ03426 396 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 E2F2Q14209 437 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 PNCKQ6P2M8 343 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 PSRC1Q6PGN9 363 aaPredicted RBP11.27□□□□□ -0.61
RHO-201ENST00000296271 TMIGD1Q6UXZ0 262 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 AMZ2Q86W34 360 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 HCAR2Q8TDS4 363 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 PPCDCQ96CD2 204 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 OSGEPL1Q9H4B0 414 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 RUBCNLQ9H714 662 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 BTNL2Q9UIR0 455 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 MYO10Q9HD67 2058 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 A0A0C4DFX4 3053 aa11.27□□□□□ -0.61
RHO-201ENST00000296271 M0QX08 132 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 LCMT2O60294 686 aaKnown RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 TNFRSF21O75509 655 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 SEC14L2O76054 403 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 ANGPTL1O95841 491 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 ACP5P13686 325 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 HSD3B1P14060 373 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 HSD3B2P26439 372 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 MAT2AP31153 395 aaKnown RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 ASMTP46597 345 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 EMX1Q04741 257 aaPredicted RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 DPTQ07507 201 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 MYBPC3Q14896 1274 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 SPCS2Q15005 226 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 FAM71E1Q6IPT2 247 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 GALNT18Q6P9A2 607 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 CCDC81Q6ZN84 652 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 MSANTD1Q6ZTZ1 278 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 TTC29Q8NA56 475 aaPredicted RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 LINC01555Q8NAE3 123 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 FUNDC2Q9BWH2 189 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 ZNF717Q9BY31 904 aaPredicted RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 EPHX3Q9H6B9 360 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 CXorf36Q9H7Y0 433 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 NDUFAF4Q9P032 175 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 KCNK6Q9Y257 313 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 KLHL20Q9Y2M5 609 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 SH3GLB1Q9Y371 365 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 SCN3AQ9NY46 2000 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 SLC16A6O15403 523 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 SUV39H1O43463 412 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 PRAMEF10O60809 474 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 B4GALT2O60909 372 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 NME6O75414 186 aaPredicted RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 KAT7O95251 611 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 SERPIND1P05546 499 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 PCMT1P22061 227 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 DNAJA1P31689 397 aaKnown RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 UBE3AQ05086 875 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 GANABQ14697 944 aaKnown RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 SKIV2LQ15477 1246 aaKnown RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 TMEM52BQ4KMG9 183 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 RBM48Q5RL73 367 aaKnown RBP11.26□□□□□ -0.61
RHO-201ENST00000296271 KIAA1211LQ6NV74 962 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 FAM129CQ86XR2 697 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 PHF6Q8IWS0 365 aaKnown RBP eCLIP11.26□□□□□ -0.61
RHO-201ENST00000296271 COX14Q96I36 57 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 DOK1Q99704 481 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 WFDC6Q9BQY6 131 aa11.26□□□□□ -0.61
RHO-201ENST00000296271 EFCAB11Q9BUY7 163 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms