RNA–Protein interactions for RNA: ENST00000247833.11

RAB3IP-201, Transcript of RAB3A interacting protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAB3IP, Length 3,690 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-201ENST00000247833 ERVW-1Q9UQF0 538 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 MYO10Q9HD67 2058 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 SGTAO43765 313 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 PRMT3O60678 531 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 IFNA14P01570 189 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 INHBBP09529 407 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 ATXN8OSP0DMR3 200 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 HOXA9P31269 272 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 PTGER1P34995 402 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 CD97P48960 835 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 GBX1Q14549 363 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 ARHGEF6Q15052 776 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF385BQ569K4 471 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 HOMEZQ8IX15 550 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF480Q8WV37 535 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 IPCEF1Q8WWN9 437 aaPredicted RBP12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 SLC38A4Q969I6 547 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 ITFG2Q969R8 447 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 FAM129BQ96TA1 746 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 DSN1Q9H410 356 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 DUSP21Q9H596 190 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 REEP4Q9H6H4 257 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 NECTIN3Q9NQS3 549 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 IL36AQ9UHA7 158 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 TMEM98Q9Y2Y6 226 aa12.11□□□□□ -0.47
RAB3IP-201ENST00000247833 IL3P08700 152 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF30P17039 623 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 HOXB6P17509 224 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 TNNI3P19429 210 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 IDSP22304 550 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 CCR2P41597 374 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF404Q494X3 552 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 RPS26P11Q5JNZ5 115 aaPredicted RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 GRHL2Q6ISB3 625 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 OR8J2Q8NGG1 315 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF675Q8TD23 568 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 POP5Q969H6 163 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 MAGEB10Q96LZ2 347 aaPredicted RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 LYSMD1Q96S90 227 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 CEP44Q9C0F1 390 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 SPHK2Q9NRA0 654 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 WDR70Q9NW82 654 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 ANGPT4Q9Y264 503 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 PCDH17O14917 1159 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 SLC16A5O15375 505 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 TLL1O43897 1013 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 MMP20O60882 483 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 BCHEP06276 602 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 IMPDH2P12268 514 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 TIMP2P16035 220 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 AZGP1P25311 298 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 KRT33BQ14525 404 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 SLC5A12Q1EHB4 618 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 CDKL4Q5MAI5 379 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 SPANXN2Q5MJ10 180 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 CNKSR3Q6P9H4 555 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 SLC34A3Q8N130 599 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 DEPDC4Q8N2C3 294 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 CPXM2Q8N436 756 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 OTULINQ96BN8 352 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 MCCC1Q96RQ3 725 aaPredicted RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 CCDC177Q9NQR7 707 aaPredicted RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 TMEM184CQ9NVA4 438 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 NDRG4Q9ULP0 352 aaKnown RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 PLXNA3P51805 1871 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 TRIM43BA6NCK2 446 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 ARHGEF15O94989 841 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 IFNW1P05000 195 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 SELENOWP63302 87 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 PRSS36Q5K4E3 855 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 MPP7Q5T2T1 576 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 ZNF296Q8WUU4 475 aaPredicted RBP12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 ABHD8Q96I13 439 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 EHD3Q9NZN3 535 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 PCDHGA6Q9Y5G7 932 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 CCDC88CQ9P219 2028 aa12.1□□□□□ -0.47
RAB3IP-201ENST00000247833 QSOX1O00391 747 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 POP7O75817 140 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 SULT1C4O75897 302 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 CCNB2O95067 398 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 MED26O95402 600 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 CKMT1AP12532 417 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 ANXA8P13928 327 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 ITGA2P17301 1181 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 MAGEA2P43356 314 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 SLC7A9P82251 487 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 MXD1Q05195 221 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 NFE2L1Q14494 772 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 TSTQ16762 297 aaKnown RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 CEACAM20Q6UY09 585 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 TRAM1L1Q8N609 369 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 OR6Q1Q8NGQ2 317 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 XAGE5Q8WWM1 108 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 NDUFAF4Q9P032 175 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 CAB39Q9Y376 341 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 LYVE1Q9Y5Y7 322 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 A8MU76 341 aa12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 EIF3FO00303 357 aaPredicted RBP12.09□□□□□ -0.47
RAB3IP-201ENST00000247833 GFRA2O00451 464 aa12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms