RNA–Protein interactions for RNA: ENST00000243326.9

RIF1-201, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RIF1, Length 15,003 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-201ENST00000243326 INTS6LQ5JSJ4 861 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 TMEM80Q96HE8 168 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ABHD16BQ9H3Z7 469 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 MED11Q9P086 117 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 PRMT3O60678 531 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 OAS1P00973 400 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 HLCSP50747 726 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 EEFSECP57772 596 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 RACK1P63244 317 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 TIGD5Q53EQ6 642 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CEACAM19Q7Z692 300 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 RFT1Q96AA3 541 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 IL17FQ96PD4 163 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 FARSBQ9NSD9 589 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 PTCH2Q9Y6C5 1203 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 XRN1Q8IZH2 1706 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 KANTRA0A1W2PQU2 76 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 E7EQ34 232 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 PLK4O00444 970 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 GOSR2O14653 212 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ETFAP13804 333 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CTNNB1P35222 781 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SH3YL1Q96HL8 342 aaPredicted RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 ARMC1Q9NVT9 282 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 DISC1C4P0D8 188 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 BLOC1S5-TXNDC5H3BN57 136 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 M0R233 179 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 PCDH17O14917 1159 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 CXCL14O95715 111 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ALDOAP04075 364 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 ZNF101Q8IZC7 436 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 TBC1D15Q8TC07 691 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 UBE2E3Q969T4 207 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ZSWIM3Q96MP5 696 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 TSNAXQ99598 290 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 SLC6A7Q99884 636 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 SLC25A18Q9H1K4 315 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 THG1LQ9NWX6 298 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 ACTR3BQ9P1U1 418 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 HS3ST4Q9Y661 456 aa7.28□□□□□ -1.24
RIF1-201ENST00000243326 ZNF638Q14966 1978 aaKnown RBP7.28□□□□□ -1.24
RIF1-201ENST00000243326 SHMT2P34897 504 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 KRBOX4Q5JUW0 171 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 POFUT2Q9Y2G5 429 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 DOK2O60496 412 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 RHOQP17081 205 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 MATN1P21941 496 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 PPIBP23284 216 aaKnown RBP7.27□□□□□ -1.24
RIF1-201ENST00000243326 ACADLP28330 430 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 ABRAXAS2Q15018 415 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 DUOXA1Q1HG43 343 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 SPIN3Q5JUX0 258 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 GPRIN1Q7Z2K8 1008 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 OR5T3Q8NGG3 340 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 OR14C36Q8NHC7 312 aa7.27□□□□□ -1.24
RIF1-201ENST00000243326 COL1A1P02452 1464 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 WASH3PC4AMC7 463 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 GRIN3BO60391 1043 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 RAB36O95755 333 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 GNG2P59768 71 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 ADAM8P78325 824 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 LARS2Q15031 903 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 SERPINA12Q8IW75 414 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 TMEM121BQ9BXQ6 578 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 SPEF2Q9C093 1822 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 AQP12BA6NM10 295 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 CDC123O75794 336 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 C3orf58Q8NDZ4 430 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 OR52B6Q8NGF0 335 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 POLE3Q9NRF9 147 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 ACP5P13686 325 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 SELPLGQ14242 412 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 TAF1AQ15573 450 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 B3GLCTQ6Y288 498 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 THOC6Q86W42 341 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 AQP12AQ8IXF9 295 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 ACVR1CQ8NER5 493 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 TRMOQ9BU70 441 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 RTCAO00442 366 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 B4GALT2O60909 372 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 ARHGDIBP52566 201 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PPP3R1P63098 170 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 Q8N402 240 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 RPH3AQ9Y2J0 694 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 ALPK2Q86TB3 2170 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 SHANK1Q9Y566 2161 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 GTF3C1Q12789 2109 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PCDHGA12O60330 932 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 CXCR2P25025 360 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 PRICKLE1Q96MT3 831 aaPredicted RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 SORBS1Q9BX66 1292 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 C5AR2Q9P296 337 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 HPGDSO60760 199 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 HRGP04196 525 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 CELP19835 753 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 RPS12P25398 132 aaKnown RBP7.27□□□□□ -1.25
RIF1-201ENST00000243326 FAM76BQ5HYJ3 339 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 CARM1Q86X55 608 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 SEC61A2Q9H9S3 476 aa7.27□□□□□ -1.25
RIF1-201ENST00000243326 ZNF510Q9Y2H8 683 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms