RNA–Protein interactions for RNA: ENSMUST00000071057.13

Ddx55-201, Transcript of ATP-dependent RNA helicase DDX55, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Ddx55, Length 2,799 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx55-201ENSMUST00000071057 Brinp2Q6DFY8 783 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Cpsf6Q6NVF9 551 aaKnown RBP10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Nudcd1Q6PIP5 582 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Lair1Q8BG84 263 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Ankrd9Q8BH83 326 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Pcdh20Q8BIZ0 952 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Slc6a17Q8BJI1 727 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Elp6Q8BK75 266 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Rhbdd3Q8BP97 385 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Q9CQF4 240 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Fam136aQ9CR98 138 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Mrpl28Q9D1B9 257 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Necab3Q9D6J4 353 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Tex22Q9D9U4 189 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Tor3aQ9ER38 385 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Spry1Q9QXV9 313 aa10.97□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Slc43a3A2AVZ9 502 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Bub1O08901 1058 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Klk1b8P07628 261 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Csn1s1P19228 313 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Resp18P47939 175 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Ppp3cbP48453 525 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 RabggtbP53612 339 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Il11ra2P70225 432 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Aup1P70295 410 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Q3TYS2 187 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Armcx5Q3UZB0 606 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Ablim3Q69ZX8 682 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Sgo2Q7TSY8 1164 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Cnpy4Q8BQ47 245 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Micu1Q8VCX5 477 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Acer2Q8VD53 275 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Uhrf1Q8VDF2 782 aaKnown RBP10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Map3k21Q8VDG6 1002 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Mlc1Q8VHK5 382 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Nipal2Q91WC7 383 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 EtfdhQ921G7 616 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Itfg1Q99KW9 610 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Cep41Q99NF3 373 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Nudt7Q99P30 236 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 ClpsQ9CQC2 113 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Lsm7Q9CQQ8 103 aaKnown RBP10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Ctrb1Q9CR35 263 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 EbplQ9D0P0 206 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Q9D112 206 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Glipr1l1Q9DAG6 236 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Olfr704Q9EPF6 315 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Aqp5Q9WTY4 265 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Mapk11Q9WUI1 364 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Mapk7Q9WVS8 806 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Cst9Q9Z0H6 137 aa10.96□□□□□ -0.65
Ddx55-201ENSMUST00000071057 Gm13283A0A087WPG5 182 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Cped1B2RX70 1026 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Zfp938E9Q9G3 579 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Gm5849J3QPE5 117 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Olfr319L7MTY4 306 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Vmn2r2L7N2E9 908 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Mkln1O89050 735 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Polr1bP70700 1135 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Bcl2a1cQ0P538 128 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Alg6Q3TAE8 507 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Adora2bQ60614 332 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Il1rapQ61730 570 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Olfr1197Q7TR13 314 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Olfr1196Q7TR14 314 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Olfr1080Q7TR67 313 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 RinlQ80UW3 563 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Catsper3Q80W99 395 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Klf8Q8BLM0 355 aaKnown RBP10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Spon2Q8BMS2 330 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Mterf1aQ8CHZ9 379 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Acaa1bQ8VCH0 424 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 PpcsQ8VDG5 311 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Pcdhga9Q91XX9 932 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Ripply3Q924S9 152 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Tinagl1Q99JR5 466 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Spz1Q99MY0 378 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Gng10Q9CXP8 68 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Rsph14Q9D3W1 341 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Dnaja2Q9QYJ0 412 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Rgs20Q9QZB1 239 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 ReckQ9Z0J1 971 aa10.96□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Tnfrsf25B1AWN9 411 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Spaca6E9Q8Q8 339 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 C2P21180 760 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Klkb1P26262 638 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Gpx3P46412 226 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Hsd11b2P51661 386 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Sesn1P58006 492 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Tsc22d1P62500 1077 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Rab33aP97950 237 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Trim67Q505D9 768 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Flot2Q60634 428 aaKnown RBP10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Pou4f2Q63934 411 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Cyp1b1Q64429 543 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 VclQ64727 1066 aaKnown RBP10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 A4galtQ67BJ4 359 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Cyp2r1Q6VVW9 501 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Ube2r2Q6ZWZ2 238 aa10.95□□□□□ -0.66
Ddx55-201ENSMUST00000071057 Olfr1152Q7TR34 310 aa10.95□□□□□ -0.66
Retrieved 100 of 22,080 RNA–protein pairs in 27.8 ms