RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Rap2aQ80ZJ1 183 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc6a17Q8BJI1 727 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pik3cbQ8BTI9 1064 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 E330021D16RikQ8BW45 371 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr850Q8VFF2 315 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Uxs1Q91XL3 420 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ift27Q9D0P8 186 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zdhhc21Q9D270 265 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 VarsQ9Z1Q9 1263 aaKnown RBP11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Frmpd3A0A140LIW3 1774 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 OsmrO70458 971 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mid1O70583 680 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 CtnsP57757 367 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Kcnk6Q3TBV4 313 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Hsf5Q5ND04 624 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr1322Q7TQW3 310 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Clic5Q8BXK9 251 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Guf1Q8C3X4 651 aaKnown RBP11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Phf21bQ8C966 487 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rab43Q8CG50 210 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dapk2Q8VDF3 370 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rnf130Q8VEM1 419 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 SelenomQ8VHC3 145 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vmn1r69Q8VIC1 319 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zdhhc7Q91WU6 308 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rsl24d1Q99L28 163 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc25a27Q9D6D0 322 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 BC025446A0A087WQT1 134 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm31371A0A1D5RM70 265 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gp5O08742 567 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 SnnP61807 88 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 RykQ01887 594 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Psmd11Q8BG32 422 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 CptpQ8BS40 216 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Lcmt2Q8BYR1 686 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gpr158Q8C419 1200 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zc2hc1cQ8CCG1 527 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc7a8Q9QXW9 531 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ptges3Q9R0Q7 160 aaKnown RBP11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Nme4Q9WV84 186 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tmem240B2RWJ3 173 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Crisp4E9PVG4 293 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm6619F6URP1 175 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc22a8O88909 537 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 P01641 117 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fabp3P11404 133 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rab8aP55258 207 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Entpd1P55772 510 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cct3P80318 545 aaKnown RBP11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 D13Ertd608eQ3UPR8 151 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 MkxQ8BIA3 353 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gatad2aQ8CHY6 629 aaKnown RBP11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Khdrbs3Q9R226 346 aaKnown RBP11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 SisF8VQM5 1818 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ttc39aA2ACP1 578 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr1153A2AVC0 318 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 PgrQ00175 926 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cdk6Q64261 326 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 ManeaQ6NXH2 462 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 BspryQ80YW5 473 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Crispld1Q8CGD2 500 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vmn1r217Q8R270 298 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gtf2a1lQ8R4I4 468 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Nsmce2Q91VT1 247 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Papd4Q91YI6 484 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Acad8Q9D7B6 413 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tbc1d20Q9D9I4 402 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ubqln2Q9QZM0 638 aa11.46□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr239A0PK55 315 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr55K7N6Q1 315 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 P01810 119 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Uba1yP31254 1058 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Wbp2P97765 261 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tmem184cQ3TPR7 525 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Taar7eQ5QD09 358 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Eif1aQ60872 144 aaKnown RBP11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Parp12Q8BZ20 711 aaKnown RBP11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tmem150cQ8C8S3 249 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr811Q8VFI1 319 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr380Q8VGT3 311 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 MmadhcQ99LS1 296 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pbx4Q99NE9 378 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tas2r119Q9JKT2 335 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Pramef17A2ASJ1 475 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Klf10O89091 479 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Fth1P09528 182 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 ChatQ03059 641 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tex10Q3URQ0 928 aaKnown RBP11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Grid2Q61625 1007 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Angptl1Q640P2 490 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Tpgs2Q66JT5 296 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gpr75Q6X632 540 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr17Q7TRM9 315 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Olfr320Q7TRZ4 306 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Clba1Q8BHN9 321 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Mettl6Q8BVH9 282 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Aph1bQ8C7N7 257 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Sphk1Q8CI15 382 aa11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gspt1Q8R050 636 aaKnown RBP11.46□□□□□ -0.58
Pcif1-201ENSMUST00000041643 Gstm4Q8R5I6 218 aa11.46□□□□□ -0.58
Retrieved 100 of 22,080 RNA–protein pairs in 53 ms