RNA–Protein interactions for RNA: ENST00000641597.1

PHGDH-223, Transcript of phosphoglycerate dehydrogenase, humanhuman

APPRIS P1 BASIC

Gene PHGDH, Length 2,585 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-223ENST00000641597 RXRGP48443 463 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 BCAP31P51572 246 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 SLBPQ14493 270 aaKnown RBP eCLIP16.16■□□□□ 0.18
PHGDH-223ENST00000641597 GANABQ14697 944 aaKnown RBP16.16■□□□□ 0.18
PHGDH-223ENST00000641597 BRAT1Q6PJG6 821 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 COMMD6Q7Z4G1 85 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 FAM9CQ8IZT9 166 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 LRRC3BQ96PB8 259 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 NEURL2Q9BR09 285 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 OR2AG1Q9H205 316 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 GPBP1L1Q9HC44 474 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-223ENST00000641597 TDP1Q9NUW8 608 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 TBCCD1Q9NVR7 557 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 PCDHGB1Q9Y5G3 927 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 LYVE1Q9Y5Y7 322 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 ELFN1P0C7U0 828 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 NPPBP16860 134 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 XPAP23025 273 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-223ENST00000641597 TIA1P31483 386 aaKnown RBP eCLIP16.16■□□□□ 0.18
PHGDH-223ENST00000641597 GRK5P34947 590 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 SYT6Q5T7P8 510 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-223ENST00000641597 LIPIQ6XZB0 460 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 PARS2Q7L3T8 475 aaKnown RBP16.16■□□□□ 0.18
PHGDH-223ENST00000641597 TECPR1Q7Z6L1 1165 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 TSPYL5Q86VY4 417 aaPredicted RBP16.16■□□□□ 0.18
PHGDH-223ENST00000641597 C12orf40Q86WS4 652 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 TRAM1L1Q8N609 369 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 TCF25Q9BQ70 676 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 GPR83Q9NYM4 423 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 SH3GLB1Q9Y371 365 aa16.16■□□□□ 0.18
PHGDH-223ENST00000641597 ADAM23O75077 832 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 CBFA2T3O75081 653 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 ATG13O75143 517 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 MYO1DO94832 1006 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 ADRA2AP08913 450 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 DOC2BQ14184 412 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 ZNF284Q2VY69 593 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 PLPP4Q5VZY2 271 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 TTC23LQ6PF05 361 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 RNF130Q86XS8 419 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 TRAPPC5Q8IUR0 188 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 ELMOD1Q8N336 334 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 MFSD4AQ8N468 514 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 DYNC2LI1Q8TCX1 351 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 SLC35A5Q9BS91 424 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 DOHHQ9BU89 302 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 CEP44Q9C0F1 390 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 ABCG4Q9H172 646 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 LRRK1Q38SD2 2015 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 CATP04040 527 aaKnown RBP16.15■□□□□ 0.18
PHGDH-223ENST00000641597 POLR2EP19388 210 aaKnown RBP16.15■□□□□ 0.18
PHGDH-223ENST00000641597 PPIGQ13427 754 aaKnown RBP eCLIP16.15■□□□□ 0.181e-6■□□□□ 10
PHGDH-223ENST00000641597 COL9A2Q14055 689 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-223ENST00000641597 INAQ16352 499 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 SLC5A12Q1EHB4 618 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 TRIM16LQ309B1 348 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 ERICH5Q6P6B1 374 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 MSANTD1Q6ZTZ1 278 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 PAGE2Q7Z2X7 111 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 CACTIN-AS1Q8N1I8 211 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 PGBD3Q8N328 593 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 OR56A3Q8NH54 315 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 LGALS12Q96DT0 336 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 CCM2Q9BSQ5 444 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 C5AR2Q9P296 337 aa16.15■□□□□ 0.18
PHGDH-223ENST00000641597 TCF20Q9UGU0 1960 aaKnown RBP16.15■□□□□ 0.18
PHGDH-223ENST00000641597 H3BM21 787 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 TNFRSF11BO00300 401 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 PCDH17O14917 1159 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 SOD1P00441 154 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 KLK1P06870 262 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 CYP2A6P11509 494 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-223ENST00000641597 ZNF30P17039 623 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 HNF4AP41235 474 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 ST13P50502 369 aaKnown RBP16.14■□□□□ 0.17
PHGDH-223ENST00000641597 EXOC3L2Q2M3D2 409 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 UTP15Q8TED0 518 aaKnown RBP16.14■□□□□ 0.17
PHGDH-223ENST00000641597 GTPBP3Q969Y2 492 aaKnown RBP16.14■□□□□ 0.17
PHGDH-223ENST00000641597 ZSCAN5AQ9BUG6 496 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 RSPO3Q9BXY4 272 aaPredicted RBP16.14■□□□□ 0.17
PHGDH-223ENST00000641597 IL36AQ9UHA7 158 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 CFAP20Q9Y6A4 193 aaKnown RBP16.14■□□□□ 0.17
PHGDH-223ENST00000641597 DOCK9Q9BZ29 2069 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 PRAMEF33A0A0G2JMD5 474 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 OR2A25A4D2G3 310 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 M0R082 166 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 RTCAO00442 366 aaKnown RBP16.14■□□□□ 0.17
PHGDH-223ENST00000641597 KPNA5O15131 536 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 SPINT1O43278 529 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 PRMT3O60678 531 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 PRAMEF10O60809 474 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 C1orf105O95561 183 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 CCL5P13501 91 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 PRLHRP49683 370 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 TAS2R50P59544 299 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 SPIBQ01892 262 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 VEZF1Q14119 521 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 ZDHHC20Q5W0Z9 365 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 DSG4Q86SJ6 1040 aa16.14■□□□□ 0.17
PHGDH-223ENST00000641597 ADCK1Q86TW2 530 aa16.14■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms