RNA–Protein interactions for RNA: ENST00000638536.1

SCN1B-206, Transcript of sodium voltage-gated channel beta subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN1B, Length 1,600 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN1B-206ENST00000638536 GTF2H2Q13888 395 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 TBCCQ15814 346 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 FAM219BQ5XKK7 198 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 GTF2H2CQ6P1K8 395 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 GOLGA7Q7Z5G4 137 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 APLFQ8IW19 511 aaPredicted RBP20.62■□□□□ 0.89
SCN1B-206ENST00000638536 KRT78Q8N1N4 520 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 RNF175Q8N4F7 328 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 CAVIN3Q969G5 261 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 ABHD17AQ96GS6 310 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 SMIM10Q96HG1 83 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 NT5DC2Q9H857 520 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 P4HTMQ9NXG6 502 aa20.62■□□□□ 0.89
SCN1B-206ENST00000638536 A0A0G2JN53 185 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 GALR3O60755 368 aaPredicted RBP20.61■□□□□ 0.89
SCN1B-206ENST00000638536 ALOX12BO75342 701 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 SERPINA6P08185 405 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 ALOX12P18054 663 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 MMP11P24347 488 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 PCDH1Q08174 1060 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 KCNAB2Q13303 367 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 TOR1AIP1Q5JTV8 583 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 EMBQ6PCB8 327 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 KIRREL2Q6UWL6 708 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 RAB43Q86YS6 212 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 OR51Q1Q8NH59 317 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 CCT6BQ92526 530 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 CRB3Q9BUF7 120 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 EFCAB11Q9BUY7 163 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 ZBTB26Q9HCK0 441 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 NXT1Q9UKK6 140 aaKnown RBP20.61■□□□□ 0.89
SCN1B-206ENST00000638536 RAB21Q9UL25 225 aa20.61■□□□□ 0.89
SCN1B-206ENST00000638536 A8MT66 165 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 BMP10O95393 424 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 NR1D1P20393 614 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 CCL11P51671 97 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 HERC3Q15034 1050 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 ACMSDQ8TDX5 336 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 C8orf44Q96CB5 159 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 TGIF2Q9GZN2 237 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 C12orf65Q9H3J6 166 aaKnown RBP20.6■□□□□ 0.89
SCN1B-206ENST00000638536 IPPKQ9H8X2 491 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 MKKSQ9NPJ1 570 aaPredicted RBP20.6■□□□□ 0.89
SCN1B-206ENST00000638536 C3orf18Q9UK00 162 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 EMCNQ9ULC0 261 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 ZNF462Q96JM2 2506 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 A0A1B0GTL3 188 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 TLDC2A0PJX2 215 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 LRIT2A6NDA9 550 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 OR7A17O14581 309 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 PRPF4O43172 522 aaKnown RBP eCLIP20.6■□□□□ 0.89
SCN1B-206ENST00000638536 NUDT17P0C025 328 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 XCR1P46094 333 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 FAAH2Q6GMR7 532 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 OR52B6Q8NGF0 335 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 MS4A6EQ96DS6 147 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 CDK15Q96Q40 435 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 RBCK1Q9BYM8 510 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 RHBGQ9H310 441 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 ZNF71Q9NQZ8 489 aaPredicted RBP20.6■□□□□ 0.89
SCN1B-206ENST00000638536 PCTPQ9UKL6 214 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 ANGPTL3Q9Y5C1 460 aa20.6■□□□□ 0.89
SCN1B-206ENST00000638536 ANKDD1BA6NHY2 528 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 IDSB3KWA1 339 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 STX16-NPEPL1H3BU86 382 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 PPP6CO00743 305 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 STX16O14662 325 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 SMIM24O75264 130 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 SH3BGRLO75368 114 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 PDGFAP04085 211 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 KRT15P19012 456 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 RASA2Q15283 850 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 OR7G3Q8NG95 312 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 PEX11GQ96HA9 241 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 PITHD1Q9GZP4 211 aaPredicted RBP20.59■□□□□ 0.89
SCN1B-206ENST00000638536 NOL11Q9H8H0 719 aaKnown RBP20.59■□□□□ 0.89
SCN1B-206ENST00000638536 RNF11Q9Y3C5 154 aa20.59■□□□□ 0.89
SCN1B-206ENST00000638536 TNPO3Q9Y5L0 923 aaKnown RBP20.59■□□□□ 0.89
SCN1B-206ENST00000638536 A6NL46 340 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 AGPSO00116 658 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 DLX3O60479 287 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 CLEC3AO75596 197 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 TSPAN8P19075 237 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 LAPTM5Q13571 262 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 DCAF10Q5QP82 559 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 GRHL2Q6ISB3 625 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 ABHD13Q7L211 337 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 MYLK4Q86YV6 388 aaPredicted RBP20.58■□□□□ 0.89
SCN1B-206ENST00000638536 LAS2Q8IYD9 372 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 ZNF843Q8N446 348 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 TTLQ8NG68 377 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 ZNF473Q8WTR7 871 aaKnown RBP20.58■□□□□ 0.89
SCN1B-206ENST00000638536 F2RL3Q96RI0 385 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 ADNPQ9H2P0 1102 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 SEMA3GQ9NS98 782 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 MKL2Q9ULH7 1088 aa20.58■□□□□ 0.89
SCN1B-206ENST00000638536 PRRC2CQ9Y520 2896 aaKnown RBP20.57■□□□□ 0.88
SCN1B-206ENST00000638536 CHST10O43529 356 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 CDH16O75309 829 aa20.57■□□□□ 0.88
SCN1B-206ENST00000638536 RPS17P08708 135 aaKnown RBP20.57■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms