RNA–Protein interactions for RNA: ENST00000637897.1

PNKP-229, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

TSL 5

Gene PNKP, Length 190 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-229ENST00000637897 CACNA1DQ01668 2161 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 TEP1Q99973 2627 aaKnown RBP7.43□□□□□ -1.22
PNKP-229ENST00000637897 CSMD1Q96PZ7 3565 aa7.43□□□□□ -1.22
PNKP-229ENST00000637897 KCNE1BA0A087WTH5 132 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 IGHV1-45A0A0A0MS14 117 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 IGHV3-20A0A0C4DH32 117 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 IDSB3KWA1 339 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 MAN1A2O60476 641 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 SNX3O60493 162 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 PRAMEF4O60810 478 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 BMP10O95393 424 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 CLDN1O95832 211 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 TBX6O95947 436 aaPredicted RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 DHRS4L1P0CG22 281 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 PYGBP11216 843 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 ENO3P13929 434 aaPredicted RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 TAC1P20366 129 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 ITGA3P26006 1051 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 GP5P40197 560 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 ST13P50502 369 aaKnown RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 MEF2AQ02078 507 aaPredicted RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 HYAL2Q12891 473 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 NAE1Q13564 534 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 TSTA3Q13630 321 aaPredicted RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 ZNF460Q14592 562 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 NR6A1Q15406 480 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 PPP1R3AQ16821 1122 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 MUM1Q2TAK8 710 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 FAM214AQ32MH5 1076 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 C18orf21Q32NC0 220 aaPredicted RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 CATSPEREQ5SY80 951 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 HECTD2Q5U5R9 776 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 PRAMEF9Q5VWM5 478 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 ZNF324BQ6AW86 544 aaPredicted RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 PRMT9Q6P2P2 845 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 TTC23LQ6PF05 361 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 AGTRAPQ6RW13 159 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 C6orf89Q6UWU4 347 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 LANCL3Q6ZV70 420 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 GALNT7Q86SF2 657 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 CEP97Q8IW35 865 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 TRIM42Q8IWZ5 723 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 AFAP1L2Q8N4X5 818 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 CLEC1AQ8NC01 280 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 OR4K1Q8NGD4 311 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 OR5T3Q8NGG3 340 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 OR9A4Q8NGU2 314 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 OR56A3Q8NH54 315 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 GABPB2Q8TAK5 448 aaPredicted RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 MAGEC3Q8TD91 643 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 TCP10LQ8TDR4 215 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 ANKRD49Q8WVL7 239 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 PYCR2Q96C36 320 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 LINGO1Q96FE5 620 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 TAAR6Q96RI8 345 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 ELAC2Q9BQ52 826 aaKnown RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 CRB3Q9BUF7 120 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 SARGQ9BW04 601 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 ZNF160Q9HCG1 818 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 SEMA3GQ9NS98 782 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 FGFR1OP2Q9NVK5 253 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 PLA2G3Q9NZ20 509 aa7.42□□□□□ -1.22
PNKP-229ENST00000637897 ZNF282Q9UDV7 671 aaPredicted RBP7.42□□□□□ -1.22
PNKP-229ENST00000637897 ITPR2Q14571 2701 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 GOLGA8RI6L899 631 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 SGK494L7N484 410 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 EIF3FO00303 357 aaPredicted RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 CDC7O00311 574 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 PEX12O00623 359 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 ZBTB14O43829 449 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 HPP00738 406 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 LDLRP01130 860 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 PRR35P0CG20 571 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 ITGAMP11215 1152 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 CDH1P12830 882 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 GP1BBP13224 206 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 EZRP15311 586 aaKnown RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 IL1RNP18510 177 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 FBLP22087 321 aaKnown RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 COL8A1P27658 744 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 CRHR1P34998 444 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 SPRP35270 261 aaPredicted RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 HSD17B2P37059 387 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 TDGF1P3P51864 188 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 EMP2P54851 167 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 TAS2R39P59534 338 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 ABATP80404 500 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 EEF1A2Q05639 463 aaKnown RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 ILF2Q12905 390 aaKnown RBP7.41□□□□□ -1.22
PNKP-229ENST00000637897 IFT88Q13099 833 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 FAM53BQ14153 422 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 RBBP7Q16576 425 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 TTLL9Q3SXZ7 439 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 MROH9Q5TGP6 573 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 GARNL3Q5VVW2 1013 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 FAAH2Q6GMR7 532 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 LINC00696Q6ZRV3 163 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 CCDC121Q6ZUS5 278 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 SPATA21Q7Z572 469 aa7.41□□□□□ -1.22
PNKP-229ENST00000637897 ZC3HC1Q86WB0 502 aaKnown RBP7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 40.6 ms