RNA–Protein interactions for RNA: ENST00000622166.1

IGHV3-54-201, Transcript of immunoglobulin heavy variable 3-54 (pseudogene), humanhuman

BASIC

Gene IGHV3-54, Length 353 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-54-201ENST00000622166 SF1Q15637 639 aaKnown RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TBCEQ15813 527 aaPredicted RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 INAQ16352 499 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 SMN1Q16637 294 aaKnown RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TRIM16LQ309B1 348 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 DEFB115Q30KQ5 88 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TRIM60Q495X7 471 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 CRB2Q5IJ48 1285 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TOR1AIP1Q5JTV8 583 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 DDX59Q5T1V6 619 aaKnown RBP eCLIP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 C1orf53Q5VUE5 145 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TMEM215Q68D42 235 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 FAM71E1Q6IPT2 247 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TMEM220Q6QAJ8 160 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 LIPIQ6XZB0 460 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 CCDC81Q6ZN84 652 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TUBA1AQ71U36 451 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF765Q7L2R6 523 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZBTB46Q86UZ6 589 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 LACC1Q8IV20 430 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLC30A8Q8IWU4 369 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 DEPDC4Q8N2C3 294 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 METTL4Q8N3J2 472 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 DNAJC22Q8N4W6 341 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 CDC26Q8NHZ8 85 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 C16orf78Q8WTQ4 265 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 MYDGFQ969H8 173 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 LGALS12Q96DT0 336 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 MED8Q96G25 268 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 COQ10AQ96MF6 247 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 CORO1BQ9BR76 489 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 ITPAQ9BY32 194 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 ALOXE3Q9BYJ1 711 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLIRPQ9GZT3 109 aaKnown RBP9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 DMRT3Q9NQL9 472 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 GPATCH2Q9NW75 528 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 TBC1D14Q9P2M4 693 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 IL36AQ9UHA7 158 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 DAPK2Q9UIK4 370 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 CCL26Q9Y258 94 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 POFUT2Q9Y2G5 429 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 DYRK1BQ9Y463 629 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 PCDHGA2Q9Y5H1 932 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 KIAA1549LQ6ZVL6 1849 aa9.24□□□□□ -0.93
IGHV3-54-201ENST00000622166 ALPK3Q96L96 1907 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 PCM1Q15154 2024 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ARRDC5A6NEK1 342 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 M0R082 166 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 MAN1A2O60476 641 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 TBX19O60806 448 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 LILRB5O75023 590 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 FGF18O76093 207 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 KLHL18O94889 574 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 CXCL14O95715 111 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 IFNA14P01570 189 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 LCKP06239 509 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ADH1AP07327 375 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 CTSLP07711 333 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 FURINP09958 794 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ARAFP10398 606 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 CD36P16671 472 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 NPPBP16860 134 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ITGA2P17301 1181 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SYN1P17600 705 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 GABRB1P18505 474 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 TGM1P22735 817 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 XPAP23025 273 aaPredicted RBP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 IRS1P35568 1242 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLC19A1P41440 591 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 PIK3CBP42338 1070 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 LIMS1P48059 325 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ATN1P54259 1190 aaPredicted RBP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 VBP1P61758 197 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 PPIGQ13427 754 aaKnown RBP eCLIP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SCARB2Q14108 478 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLBPQ14493 270 aaKnown RBP eCLIP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 IRF3Q14653 427 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF77Q15935 545 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 MICAQ29983 383 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF630Q2M218 657 aaPredicted RBP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ARHGAP15Q53QZ3 475 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 PAGE2BQ5JRK9 111 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 COX20Q5RI15 118 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 HIST2H2AA3Q6FI13 130 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ADNP2Q6IQ32 1131 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 TUBA3EQ6PEY2 450 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 UNC5DQ6UXZ4 953 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 AHSA2Q719I0 299 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 RTL10Q7L3V2 364 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLC46A3Q7Z3Q1 461 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 PHF6Q8IWS0 365 aaKnown RBP eCLIP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 LRRC56Q8IYG6 542 aaPredicted RBP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 OXR1Q8N573 874 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SLC5A8Q8N695 610 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 LILRA3Q8N6C8 439 aaPredicted RBP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 DENND6BQ8NEG7 585 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 OR10G2Q8NGC3 310 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 SETD7Q8WTS6 366 aaKnown RBP9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 ZNF480Q8WV37 535 aa9.23□□□□□ -0.93
IGHV3-54-201ENST00000622166 GGHQ92820 318 aa9.23□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 139.7 ms