RNA–Protein interactions for RNA: ENST00000576222.1

PCDHGB3-201, Transcript of protocadherin gamma subfamily B, 3, humanhuman

TSL 1 (best) BASIC

Gene PCDHGB3, Length 4,727 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHGB3-201ENST00000576222 NEIL3Q8TAT5 605 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 EFCAB11Q9BUY7 163 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 C1QTNF1Q9BXJ1 281 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 WDR6Q9NNW5 1121 aaKnown RBP12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 SCML2Q9UQR0 700 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 CITO14578 2027 aa12.68□□□□□ -0.38
PCDHGB3-201ENST00000576222 CLDN7O95471 211 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 CH25HO95992 272 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 ITGAMP11215 1152 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF280AP59817 542 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 GINS1Q14691 196 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 STEAP3Q658P3 488 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 RNF111Q6ZNA4 994 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 FUNDC1Q8IVP5 155 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 LSM14AQ8ND56 463 aaKnown RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 PROKR1Q8TCW9 393 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 UPF1Q92900 1129 aaKnown RBP eCLIP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 PIP5K1AQ99755 562 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 DPCDQ9BVM2 203 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 ABCG5Q9H222 651 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 SRRDQ9UH36 339 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 PCDHB11Q9Y5F2 797 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 TRAV19A0A0A6YYK7 116 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 A0A1W2PQL4 384 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 SEPT4O43236 478 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 RPS17P08708 135 aaKnown RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 PRSS56P0CW18 603 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 C21orf33P30042 268 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 SMN1Q16637 294 aaKnown RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 RNF130Q86XS8 419 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 OR7G1Q8NGA0 311 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 CCM2Q9BSQ5 444 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 FOLH1BQ9HBA9 442 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 IRS2Q9Y4H2 1338 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 ABHD14A-ACY1A0A1B0GW23 586 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNF879B4DU55 563 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 HCN1O60741 890 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 APOL3O95236 402 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC35G4P0C7Q5 338 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 UQCRC1P31930 480 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 REEP3Q6NUK4 255 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 MAMDC4Q6UXC1 1216 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 THOC6Q86W42 341 aaKnown RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 C7orf57Q8NEG2 295 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 C1orf216Q8TAB5 229 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 ING5Q8WYH8 240 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 BTBD1Q9H0C5 482 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 CD93Q9NPY3 652 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 CALML5Q9NZT1 146 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 PPIEQ9UNP9 301 aaKnown RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 ERVW-1Q9UQF0 538 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 EXOSC1Q9Y3B2 195 aaKnown RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 MYH9P35579 1960 aaKnown RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 SH3D21A4FU49 640 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 SYN3O14994 580 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 CAPN5O15484 640 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 GABARAPO95166 117 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 ECDO95905 644 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 IQCF3P0C7M6 154 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 IDUAP35475 653 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 HSF5Q4G112 596 aaPredicted RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 OR4C6Q8NH72 309 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 OLIG1Q8TAK6 271 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 PLD4Q96BZ4 506 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 CCSER2Q9H7U1 834 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 THG1LQ9NWX6 298 aaKnown RBP12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 NUP50Q9UKX7 468 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 OARD1Q9Y530 152 aa12.67□□□□□ -0.38
PCDHGB3-201ENST00000576222 A0A0D9SEW6 157 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 TMEM221A6NGB7 291 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 SERPINA3P01011 423 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 KLK1P06870 262 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 ADARB1P78563 741 aaKnown RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 CBX2Q14781 532 aaPredicted RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 EIF4HQ15056 248 aaKnown RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 TMEM220Q6QAJ8 160 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 FRRS1Q6ZNA5 592 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 CACUL1Q86Y37 369 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 KIF18BQ86Y91 864 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 TMEM151AQ8N4L1 468 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 MKRN2Q9H000 416 aaKnown RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 COQ3Q9NZJ6 369 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 MARK1Q9P0L2 795 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 FXYD6-FXYD2A0A087WZ82 144 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 CTDSP2O14595 271 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC19A2O60779 497 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 GBAP04062 536 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 PRR5P85299 388 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 RBBP4Q09028 425 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 DSG2Q14126 1118 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 ZNHIT3Q15649 155 aaPredicted RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 C18orf21Q32NC0 220 aaPredicted RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 MPPE1Q53F39 396 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 GDPGP1Q6ZNW5 385 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 SLC24A5Q71RS6 500 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 DEFB128Q7Z7B8 93 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 SRFBP1Q8NEF9 429 aaKnown RBP12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 FXYD6Q9H0Q3 95 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 TMEM27Q9HBJ8 222 aa12.66□□□□□ -0.38
PCDHGB3-201ENST00000576222 P2RX2Q9UBL9 471 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms