RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 TOR1AIP1Q5JTV8 583 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 RNF148Q8N7C7 305 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 BAHD1Q8TBE0 780 aaPredicted RBP16.88■□□□□ 0.29
HERC2-208ENST00000566635 C16orf78Q8WTQ4 265 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 TESCQ96BS2 214 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 CCDC124Q96CT7 223 aaKnown RBP16.88■□□□□ 0.29
HERC2-208ENST00000566635 C17orf62Q9BQA9 187 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 TRIM8Q9BZR9 551 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 ANKMY1Q9P2S6 941 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 LRIT1Q9P2V4 623 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 PILRAQ9UKJ1 303 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 PCDHGA2Q9Y5H1 932 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 KLK4Q9Y5K2 254 aa16.88■□□□□ 0.29
HERC2-208ENST00000566635 DYTNA2CJ06 578 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 SCAMP2O15127 329 aaKnown RBP16.87■□□□□ 0.29
HERC2-208ENST00000566635 IL6P05231 212 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 GSTM2P28161 218 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 ASMTP46597 345 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 TRMT5Q32P41 509 aaKnown RBP16.87■□□□□ 0.29
HERC2-208ENST00000566635 NKAIN2Q5VXU1 208 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 FRMPD2BQ6IN97 320 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 PGM2L1Q6PCE3 622 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 HPS6Q86YV9 775 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 AMER3Q8N944 861 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 TRPV3Q8NET8 790 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 RGMAQ96B86 450 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 LRRC58Q96CX6 371 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 MS4A6EQ96DS6 147 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 OR2A5Q96R48 311 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 GPATCH1Q9BRR8 931 aaKnown RBP16.87■□□□□ 0.29
HERC2-208ENST00000566635 GAREM1Q9H706 876 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 CAPN10Q9HC96 672 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 AHSPQ9NZD4 102 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 PRPF19Q9UMS4 504 aaKnown RBP16.87■□□□□ 0.29
HERC2-208ENST00000566635 EXO1Q9UQ84 846 aaKnown RBP16.87■□□□□ 0.29
HERC2-208ENST00000566635 ARHGAP10A1A4S6 786 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 P2RX6O15547 441 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 RASSF9O75901 435 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 COX7A2P14406 83 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 S100A3P33764 101 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 GFERP55789 205 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 TAS2R50P59544 299 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 COL9A2Q14055 689 aaPredicted RBP16.87■□□□□ 0.29
HERC2-208ENST00000566635 CCDC6Q16204 474 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 ADPRMQ3LIE5 342 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 TRIM61Q5EBN2 209 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 KLHL35Q6PF15 583 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 ZNF793Q6ZN11 406 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 FAM92BQ6ZTR7 304 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 DHDDSQ86SQ9 333 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 ASPGQ86U10 573 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 MMP21Q8N119 569 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 PUM2Q8TB72 1066 aaKnown RBP eCLIP16.87■□□□□ 0.291e-8■■■□□ 19.1
HERC2-208ENST00000566635 SAP25Q8TEE9 199 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 WDR60Q8WVS4 1066 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 ZUFSPQ96AP4 578 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 TEFMQ96QE5 360 aaKnown RBP16.87■□□□□ 0.29
HERC2-208ENST00000566635 OR52E6Q96RD3 313 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 SMOC1Q9H4F8 434 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 DENND2DQ9H6A0 471 aaPredicted RBP16.87■□□□□ 0.29
HERC2-208ENST00000566635 BTBD3Q9Y2F9 522 aa16.87■□□□□ 0.29
HERC2-208ENST00000566635 ARID1BQ8NFD5 2236 aaPredicted RBP16.86■□□□□ 0.29
HERC2-208ENST00000566635 LOC105369274A0A096LPK9 316 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 LOC102723532A0A0G2JNH3 316 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 ERI3O43414 337 aaKnown RBP16.86■□□□□ 0.29
HERC2-208ENST00000566635 PRMT3O60678 531 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 FKBP9O95302 570 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 CDH3P22223 829 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 ALDH4A1P30038 563 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 HOXD12P35452 270 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 MTTPP55157 894 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 OR1D5P58170 312 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 C21orf58P58505 322 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 SNRPNP63162 240 aaKnown RBP16.86■□□□□ 0.29
HERC2-208ENST00000566635 MC1RQ01726 317 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 CEACAM7Q14002 265 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 CCNYL2Q5T2Q4 361 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 FBXW10Q5XX13 1052 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 OR4F3Q6IEY1 312 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 CYB5D1Q6P9G0 228 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 DNAJC14Q6Y2X3 702 aaPredicted RBP16.86■□□□□ 0.29
HERC2-208ENST00000566635 ANKRD46Q86W74 232 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 NUDT13Q86X67 352 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 OR4N4Q8N0Y3 316 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 DPP10Q8N608 796 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 ZFYVE21Q9BQ24 234 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 CENPKQ9BS16 269 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 SLC6A16Q9GZN6 736 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 SEMA6CQ9H3T2 930 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 MYNNQ9NPC7 610 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 ADA2Q9NZK5 511 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 NEUROG3Q9Y4Z2 214 aa16.86■□□□□ 0.29
HERC2-208ENST00000566635 TRIM38O00635 465 aa16.85■□□□□ 0.29
HERC2-208ENST00000566635 CASC3O15234 703 aaKnown RBP16.85■□□□□ 0.29
HERC2-208ENST00000566635 CAPN5O15484 640 aaPredicted RBP16.85■□□□□ 0.29
HERC2-208ENST00000566635 KIF1CO43896 1103 aaKnown RBP16.85■□□□□ 0.29
HERC2-208ENST00000566635 TMPRSS11DO60235 418 aa16.85■□□□□ 0.29
HERC2-208ENST00000566635 IL3P08700 152 aa16.85■□□□□ 0.29
HERC2-208ENST00000566635 PIM1P11309 404 aaPredicted RBP16.85■□□□□ 0.29
HERC2-208ENST00000566635 HPCAL1P37235 193 aa16.85■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms