RNA–Protein interactions for RNA: ENST00000554785.1

PRPF39-208, Transcript of pre-mRNA processing factor 39, humanhuman

TSL 2

Gene PRPF39, Length 2,121 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF39-208ENST00000554785 PSMA3P25788 255 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 DCTP40126 519 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 GP5P40197 560 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 BTDP43251 543 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 LHX1P48742 406 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 NPY4RP50391 375 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ACLYP53396 1101 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CDH11P55287 796 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 DEFB103AP81534 67 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MAT1AQ00266 395 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 POU5F1Q01860 360 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ROR1Q01973 937 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 LGALS3BPQ08380 585 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MZT1Q08AG7 82 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CUL3Q13618 768 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 VEZF1Q14119 521 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 RBBP5Q15291 538 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 LPAL2Q16609 132 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CCDC57Q2TAC2 916 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PHLDA2Q53GA4 152 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CAVIN4Q5BKX8 364 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 TECRLQ5HYJ1 363 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 C6orf136Q5SQH8 315 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 HECTD3Q5T447 861 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 SLC27A1Q6PCB7 646 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PSRC1Q6PGN9 363 aaPredicted RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 C19orf48Q6RUI8 117 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 SLC26A9Q7LBE3 791 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ARHGAP22Q7Z5H3 698 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 TLK2Q86UE8 772 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 METTL23Q86XA0 190 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 TMEM139Q8IV31 216 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MYOCDQ8IZQ8 938 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 LMNTD1Q8N9Z9 388 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 THAP8Q8NA92 274 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 GRHL3Q8TE85 626 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 FAM151AQ8WW52 585 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 HSD17B8Q92506 261 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 SLC47A1Q96FL8 570 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 THOC1Q96FV9 657 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 NSL1Q96IY1 281 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF354BQ96LW1 612 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 RMDN2Q96LZ7 410 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 FERMT1Q9BQL6 677 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MGME1Q9BQP7 344 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ADPGKQ9BRR6 497 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 RHNO1Q9BSD3 238 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MIS12Q9H081 205 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 TRPV6Q9H1D0 765 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 S1PR5Q9H228 398 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MTIF3Q9H2K0 278 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 FZD8Q9H461 694 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 BICC1Q9H694 974 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CDH20Q9HBT6 801 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF334Q9HCZ1 680 aaPredicted RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 A4GALTQ9NPC4 353 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 GKN1Q9NS71 199 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 SPHK1Q9NYA1 384 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 COQ3Q9NZJ6 369 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 DAPK2Q9UIK4 370 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ACAD8Q9UKU7 415 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 FLT1P17948 1338 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PLXNA4Q9HCM2 1894 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MYH7BA7E2Y1 1941 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ZNF462Q96JM2 2506 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 HELZ2Q9BYK8 2649 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 KIAA1671Q9BY89 1806 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 USP9XQ93008 2570 aaPredicted RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 NAV1Q8NEY1 1877 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 DOCK5Q9H7D0 1870 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 LOXHD1Q8IVV2 1947 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ATG2BQ96BY7 2078 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 A0A1W2PN81 502 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ARHGEF37A1IGU5 675 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 M0R296 226 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PLOD2O00469 737 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MPHOSPH10O00566 681 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CXCL11O14625 94 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 WDR46O15213 610 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 LMX1BO60663 402 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 SOCS5O75159 536 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PRKRAO75569 313 aaKnown RBP1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PIGNO95427 931 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 ACSL3O95573 720 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PRSS1P07477 247 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CSN3P07498 182 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 SP1P08047 785 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 IGHV4-38-2P0DP08 117 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 LIFP15018 202 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PDGFRAP16234 1089 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CA4P22748 312 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 JAK1P23458 1154 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PPP2R1AP30153 589 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CDC25CP30307 473 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 HOXC8P31273 242 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CA8P35219 290 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 PTGER4P35408 488 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CHRNA7P36544 502 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 MNDAP41218 407 aa1.39□□□□□ -2.19
PRPF39-208ENST00000554785 CAPZA1P52907 286 aa1.39□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms