RNA–Protein interactions for RNA: ENST00000553904.1

FOXN3-205, Transcript of forkhead box N3, humanhuman

TSL 3

Gene FOXN3, Length 337 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXN3-205ENST00000553904 ZNF740Q8NDX6 193 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 SPATA4Q8NEY3 305 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 STAG3L4Q8TBR4 150 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 ADAMTS18Q8TE60 1221 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 NR4A3Q92570 626 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 UBE2E3Q969T4 207 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 RELTQ969Z4 430 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 TMEM125Q96AQ2 219 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 OLFM1Q99784 485 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 MACROD1Q9BQ69 325 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 SLX1AQ9BQ83 275 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 PHACTR1Q9C0D0 580 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 ROGDIQ9GZN7 287 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 KCNF1Q9H3M0 494 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 EHD1Q9H4M9 534 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 NT5DC2Q9H857 520 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 PRDM9Q9NQV7 894 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 CD274Q9NZQ7 290 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 NTNG1Q9Y2I2 539 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 CSAG2Q9Y5P2 127 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 SPACA6W5XKT8 324 aa6.14□□□□□ -1.43
FOXN3-205ENST00000553904 GCN1Q92616 2671 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SMG1Q96Q15 3661 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 PIKFYVEQ9Y2I7 2098 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CCDC189A1A4V9 331 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 A1L4Q6 167 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 KLRC4-KLRK1H3BQV0 150 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CDC7O00311 574 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 B3GALT2O43825 422 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CLEC3AO75596 197 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 STK16O75716 305 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CDC123O75794 336 aaPredicted RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 STATHP02808 62 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 ZNF888P0CJ79 500 aaPredicted RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CCDC166P0CW27 439 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SMIM10L1P0DMW3 83 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 ESRRAP11474 423 aaPredicted RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CRABP2P29373 138 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 GGT5P36269 586 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 GP5P40197 560 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CD96P40200 585 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 HNF4AP41235 474 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 RPL21P46778 160 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CYB561P49447 251 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 HSD17B7P56937 341 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SLC26A5P58743 744 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 RAB10P61026 200 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 BTN3A2P78410 334 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 REEP5Q00765 189 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 RHAGQ02094 409 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 ALDH6A1Q02252 535 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SRSF11Q05519 484 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 EFTUD2Q15029 972 aaKnown RBP eCLIP6.13□□□□□ -1.433e-7■■■■□ 23
FOXN3-205ENST00000553904 ZRSR2Q15696 482 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 PPP1R3AQ16821 1122 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 ZNF324BQ6AW86 544 aaPredicted RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SLC25A25Q6KCM7 469 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 TRIM40Q6P9F5 258 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 XKRXQ6PP77 449 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SBSNQ6UWP8 590 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 LANCL3Q6ZV70 420 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CHSY3Q70JA7 882 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 PRSS41Q7RTY9 318 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 TBC1D1Q86TI0 1168 aaPredicted RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CTAGE3PQ8IX95 158 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 ZNF595Q8IYB9 648 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 TMEM132CQ8N3T6 1108 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 UTP15Q8TED0 518 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CCT6BQ92526 530 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 GAL3ST3Q96A11 431 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 KIAA1191Q96A73 305 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 RHBDF1Q96CC6 855 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 PTCD3Q96EY7 689 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SMIM10Q96HG1 83 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 PWWP2AQ96N64 755 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 TSNARE1Q96NA8 513 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 OR4K3Q96R72 315 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SERINC2Q96SA4 455 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CCDC77Q9BR77 488 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CENPKQ9BS16 269 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 TRIM51Q9BSJ1 452 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 EFCAB11Q9BUY7 163 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 DEFB126Q9BYW3 111 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SLC6A16Q9GZN6 736 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 TSPYL1Q9H0U9 437 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 CDCP1Q9H5V8 836 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 NMRAL1Q9HBL8 299 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 SAYSD1Q9NPB0 183 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 LANCL2Q9NS86 450 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 RYDENQ9NUL5 291 aaKnown RBP6.13□□□□□ -1.43
FOXN3-205ENST00000553904 DNAJC11Q9NVH1 559 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 WWOXQ9NZC7 414 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 LRFN1Q9P244 771 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 ADGRE2Q9UHX3 823 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 RNF112Q9ULX5 631 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 MMACHCQ9Y4U1 282 aa6.13□□□□□ -1.43
FOXN3-205ENST00000553904 HELZ2Q9BYK8 2649 aaKnown RBP6.12□□□□□ -1.43
FOXN3-205ENST00000553904 TRGV8A0A0C4DH27 118 aa6.12□□□□□ -1.43
FOXN3-205ENST00000553904 IGHV3-20A0A0C4DH32 117 aa6.12□□□□□ -1.43
FOXN3-205ENST00000553904 LRIT2A6NDA9 550 aa6.12□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms