RNA–Protein interactions for RNA: ENST00000547486.1

CPSF6-204, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 2

Gene CPSF6, Length 872 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-204ENST00000547486 TBC1D20Q96BZ9 403 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 SMIM10Q96HG1 83 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 ZNF354BQ96LW1 612 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 RUNDC3BQ96NL0 473 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 SIGLEC12Q96PQ1 595 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 OR1F2PQ96R84 312 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 NAPGQ99747 312 aaPredicted RBP12.55□□□□□ -0.4
CPSF6-204ENST00000547486 AICDAQ9GZX7 198 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 MMP25Q9NPA2 562 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 ABI3Q9P2A4 366 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 TEKT2Q9UIF3 430 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 PYCARDQ9ULZ3 195 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 SCN3AQ9NY46 2000 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 CELSR2Q9HCU4 2923 aa12.55□□□□□ -0.4
CPSF6-204ENST00000547486 PABPN1LA6NDY0 278 aaKnown RBP12.54□□□□□ -0.4
CPSF6-204ENST00000547486 EFCAB8A8MWE9 144 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 C4orf51C9J302 202 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 B4GALT2O60909 372 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 UNC5CO95185 931 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 AHRP35869 848 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 GDF5P43026 501 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 REEP5Q00765 189 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 CBLBQ13191 982 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 TUBA3CQ13748 450 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 USP10Q14694 798 aaKnown RBP12.54□□□□□ -0.4
CPSF6-204ENST00000547486 RBBP5Q15291 538 aaKnown RBP12.54□□□□□ -0.4
CPSF6-204ENST00000547486 EXT1Q16394 746 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 ZNF766Q5HY98 468 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 SPINK14Q6IE38 97 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 TUBA3EQ6PEY2 450 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 GFRALQ6UXV0 394 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 SPATA6LQ8N4H0 392 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 KIF2BQ8N4N8 673 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 NKAPQ8N5F7 415 aaKnown RBP12.54□□□□□ -0.4
CPSF6-204ENST00000547486 MDS2Q8NDY4 140 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 DNAJB8Q8NHS0 232 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 SUN3Q8TAQ9 357 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 CREB3L4Q8TEY5 395 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 ANKRD7Q92527 254 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 KRT12Q99456 494 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 HES7Q9BYE0 225 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 UNKQ9C0B0 810 aaKnown RBP12.54□□□□□ -0.4
CPSF6-204ENST00000547486 SLC6A16Q9GZN6 736 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 PELI2Q9HAT8 420 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 DYRK1BQ9Y463 629 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 NOTCH2Q04721 2471 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 CRYBG3Q68DQ2 2970 aa12.54□□□□□ -0.4
CPSF6-204ENST00000547486 A0A1B0GUH1 482 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 CXorf49A8MYA2 514 aaPredicted RBP12.53□□□□□ -0.4
CPSF6-204ENST00000547486 CCDC188H7C350 402 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 WISP3O95389 354 aaPredicted RBP12.53□□□□□ -0.4
CPSF6-204ENST00000547486 CRYABP02511 175 aaKnown RBP12.53□□□□□ -0.4
CPSF6-204ENST00000547486 OR4D2P58180 307 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 SLC26A5P58743 744 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 CDKL1Q00532 357 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 RGS1Q08116 209 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 TSNQ15631 228 aaKnown RBP12.53□□□□□ -0.4
CPSF6-204ENST00000547486 MEP1AQ16819 746 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 SLCO4C1Q6ZQN7 724 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 CAPN12Q6ZSI9 719 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 TMPRSS11BQ86T26 416 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 ZBED8Q8IZ13 594 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 TBC1D19Q8N5T2 526 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 PTCHD1Q96NR3 888 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 LPAR4Q99677 370 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 CAB39LQ9H9S4 337 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 KLHL1Q9NR64 748 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 SEC14L3Q9UDX4 400 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 MTO1Q9Y2Z2 717 aaKnown RBP12.53□□□□□ -0.4
CPSF6-204ENST00000547486 OARD1Q9Y530 152 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 KCNE2Q9Y6J6 123 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 CROCCQ5TZA2 2017 aa12.53□□□□□ -0.4
CPSF6-204ENST00000547486 TAPBPO15533 448 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 PRMT3O60678 531 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 MYBL2P10244 700 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 MAOAP21397 527 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 SSTR1P30872 391 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 PAFAH1B1P43034 410 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 SLC6A12P48065 614 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 PER3P56645 1201 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 OR1C1Q15619 314 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 TOR1AIP1Q5JTV8 583 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 ZNF468Q5VIY5 522 aaPredicted RBP12.52□□□□□ -0.41
CPSF6-204ENST00000547486 ABHD13Q7L211 337 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 NFAM1Q8NET5 270 aaPredicted RBP12.52□□□□□ -0.41
CPSF6-204ENST00000547486 TRPV3Q8NET8 790 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 ELP5Q8TE02 316 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 RHBDF1Q96CC6 855 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 SCMH1Q96GD3 660 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 VPS39Q96JC1 886 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 EGFL8Q99944 293 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 AIF1LQ9BQI0 150 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 UTP23Q9BRU9 249 aaKnown RBP12.52□□□□□ -0.41
CPSF6-204ENST00000547486 RHBGQ9H310 441 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 RHOJQ9H4E5 214 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 CDCP1Q9H5V8 836 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 GPAMQ9HCL2 828 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 NECTIN3Q9NQS3 549 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 CTNNAL1Q9UBT7 734 aa12.52□□□□□ -0.41
CPSF6-204ENST00000547486 IGKV3D-11A0A0A0MRZ8 115 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.1 ms