RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 KIAA0232Q92628 1395 aa3.65□□□□□ -1.82
SNHG1-224ENST00000545688 SSH2Q76I76 1423 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 YTHDC2Q9H6S0 1430 aaKnown RBP3.65□□□□□ -1.83
SNHG1-224ENST00000545688 PTGESO14684 152 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 GPRIN2O60269 458 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 CD22P20273 847 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 SPECC1Q5M775 1068 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 CEACAM19Q7Z692 300 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 OR10G7Q8NGN6 311 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 DGAT2Q96PD7 388 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 SLC2A11Q9BYW1 496 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 NOL11Q9H8H0 719 aaKnown RBP3.65□□□□□ -1.83
SNHG1-224ENST00000545688 CDH20Q9HBT6 801 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 GTSE1Q9NYZ3 720 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 ELF5Q9UKW6 265 aaPredicted RBP3.65□□□□□ -1.83
SNHG1-224ENST00000545688 TMEM5Q9Y2B1 443 aa3.65□□□□□ -1.83
SNHG1-224ENST00000545688 CPDO75976 1380 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 SPATA31E1Q6ZUB1 1445 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 ATP10DQ9P241 1426 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 IGLV4-3A0A075B6K6 122 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 SURF4O15260 269 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 TLX2O43763 284 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-224ENST00000545688 GALR3O60755 368 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-224ENST00000545688 BEST1O76090 585 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 NXPH4O95158 308 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 PGM3O95394 542 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 ACSL3O95573 720 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 BAG3O95817 575 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 ALDH1B1P30837 517 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 CLNS1AP54105 237 aaKnown RBP3.64□□□□□ -1.83
SNHG1-224ENST00000545688 DCDC1P59894 354 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 SRSF9Q13242 221 aaKnown RBP eCLIP3.64□□□□□ -1.83
SNHG1-224ENST00000545688 IL11RAQ14626 422 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 NPTX1Q15818 432 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 C3P1Q6ZMU1 363 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 SLC24A5Q71RS6 500 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 PHC2Q8IXK0 858 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 SUMF1Q8NBK3 374 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 NOA1Q8NC60 698 aaKnown RBP3.64□□□□□ -1.83
SNHG1-224ENST00000545688 TYMSOSQ8TAI1 123 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 TEKT4Q8WW24 435 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 METTL21AQ8WXB1 218 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 GCNAQ96QF7 691 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 MXD3Q9BW11 206 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 EGLN3Q9H6Z9 239 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 CPSF2Q9P2I0 782 aaKnown RBP3.64□□□□□ -1.83
SNHG1-224ENST00000545688 FRMD4AQ9P2Q2 1039 aaPredicted RBP3.64□□□□□ -1.83
SNHG1-224ENST00000545688 IL17BQ9UHF5 180 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 BAIAP2L1Q9UHR4 511 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 GPR34Q9UPC5 381 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 ATP7BP35670 1465 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 COL24A1Q17RW2 1714 aa3.64□□□□□ -1.83
SNHG1-224ENST00000545688 PHRF1Q9P1Y6 1649 aaKnown RBP3.63□□□□□ -1.83
SNHG1-224ENST00000545688 OVOS2A0A0G2JMS6 1433 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 OVOS2A0A0J9YW53 1432 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 PIK3C2GO75747 1445 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 OVOS2Q6IE36 1432 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 ANKRD18BA2A2Z9 1011 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 HPP00738 406 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 CSN3P07498 182 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 CYP11B2P19099 503 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 AOC1P19801 751 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 KRTAP10-8P60410 259 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 PRKG2Q13237 762 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 VWC2Q2TAL6 325 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 SYT2Q8N9I0 419 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-224ENST00000545688 CPNE1Q99829 537 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 ATF6BQ99941 703 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 CCDC106Q9BWC9 280 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 KLHL4Q9C0H6 718 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 ADNPQ9H2P0 1102 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 CNOT10Q9H9A5 744 aaKnown RBP3.63□□□□□ -1.83
SNHG1-224ENST00000545688 ZNF107Q9UII5 783 aaPredicted RBP3.63□□□□□ -1.83
SNHG1-224ENST00000545688 TSPAN16Q9UKR8 245 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 KNDC1Q76NI1 1749 aa3.63□□□□□ -1.83
SNHG1-224ENST00000545688 PARP4Q9UKK3 1724 aaKnown RBP3.63□□□□□ -1.83
SNHG1-224ENST00000545688 PAPPAQ13219 1627 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 LMO7Q8WWI1 1683 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 PHF1O43189 567 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-224ENST00000545688 SNX3O60493 162 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 SAGP10523 405 aaPredicted RBP3.62□□□□□ -1.83
SNHG1-224ENST00000545688 MYOGP15173 224 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 EPCAMP16422 314 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 AADACP22760 399 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 ACTN2P35609 894 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 LIG4P49917 911 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 CLDN15P56746 228 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 POLR2LP62875 67 aaKnown RBP3.62□□□□□ -1.83
SNHG1-224ENST00000545688 RASGEF1BQ0VAM2 473 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 OPCMLQ14982 345 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 CAMKMTQ7Z624 323 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 KCNMB4Q86W47 210 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 OR4N5Q8IXE1 308 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 GPC2Q8N158 579 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 RASGEF1AQ8N9B8 481 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 OR4D10Q8NGI6 311 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 KCNE4Q8WWG9 221 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 KLHL5Q96PQ7 755 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 FEVQ99581 238 aa3.62□□□□□ -1.83
SNHG1-224ENST00000545688 CDCA3Q99618 268 aaPredicted RBP3.62□□□□□ -1.83
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms