RNA–Protein interactions for RNA: ENST00000536871.6

SMG6-203, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 2 BASIC

Gene SMG6, Length 1,865 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-203ENST00000536871 FBXL12Q9NXK8 326 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 FAF1Q9UNN5 650 aaPredicted RBP13.02□□□□□ -0.32
SMG6-203ENST00000536871 SLC17A4Q9Y2C5 497 aa13.02□□□□□ -0.32
SMG6-203ENST00000536871 CACNB4O00305 520 aaPredicted RBP13.02□□□□□ -0.33
SMG6-203ENST00000536871 NOBOXO60393 691 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 DNAJA1P31689 397 aaKnown RBP13.02□□□□□ -0.33
SMG6-203ENST00000536871 DCTP40126 519 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 ABATP80404 500 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 HEPACAMQ14CZ8 416 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 NKG7Q16617 165 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 KHDRBS2Q5VWX1 349 aaKnown RBP13.02□□□□□ -0.33
SMG6-203ENST00000536871 PARM1Q6UWI2 310 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 RBM44Q6ZP01 1051 aaKnown RBP13.02□□□□□ -0.33
SMG6-203ENST00000536871 TMEM26Q6ZUK4 368 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 USP30Q70CQ3 517 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 THAP5Q7Z6K1 395 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 HORMAD1Q86X24 394 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 PTOV1Q86YD1 416 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 DENND6BQ8NEG7 585 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 GANCQ8TET4 914 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 NECTIN4Q96NY8 510 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 SLC17A9Q9BYT1 436 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 RBM38Q9H0Z9 239 aaKnown RBP13.02□□□□□ -0.33
SMG6-203ENST00000536871 CHST8Q9H2A9 424 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 CARS2Q9HA77 564 aaKnown RBP13.02□□□□□ -0.33
SMG6-203ENST00000536871 MIEF1Q9NQG6 463 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 TAS2R9Q9NYW1 312 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 SPASTQ9UBP0 616 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 SLC23A2Q9UGH3 650 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 TAC3Q9UHF0 121 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 NCKAP1Q9Y2A7 1128 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 HSPE1-MOB4S4R3N1 261 aa13.02□□□□□ -0.33
SMG6-203ENST00000536871 TCF20Q9UGU0 1960 aaKnown RBP13.01□□□□□ -0.33
SMG6-203ENST00000536871 K7EQS6 105 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 CAPN5O15484 640 aaPredicted RBP13.01□□□□□ -0.33
SMG6-203ENST00000536871 ZNF682O95780 498 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 SEMG1P04279 462 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 GNAO1P09471 354 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 FPR1P21462 350 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 RAB28P51157 221 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 CLCNKAP51800 687 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 ZNF630Q2M218 657 aaPredicted RBP13.01□□□□□ -0.33
SMG6-203ENST00000536871 SPESP1Q6UW49 350 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 ZC3H7AQ8IWR0 971 aaKnown RBP13.01□□□□□ -0.33
SMG6-203ENST00000536871 METTL25Q8N6Q8 603 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 ARL10Q8N8L6 244 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 SETD9Q8NE22 299 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 FGF14Q92915 247 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 TUBA1CQ9BQE3 449 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 LGR4Q9BXB1 951 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 MS4A8Q9BY19 250 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 S1PR5Q9H228 398 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 OR51B5Q9H339 312 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 TRPV5Q9NQA5 729 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 BTBD3Q9Y2F9 522 aa13.01□□□□□ -0.33
SMG6-203ENST00000536871 PLOD2O00469 737 aa13□□□□□ -0.33
SMG6-203ENST00000536871 SLC16A6O15403 523 aa13□□□□□ -0.33
SMG6-203ENST00000536871 SUV39H1O43463 412 aa13□□□□□ -0.33
SMG6-203ENST00000536871 UGT2B11O75310 529 aa13□□□□□ -0.33
SMG6-203ENST00000536871 CLEC3AO75596 197 aa13□□□□□ -0.33
SMG6-203ENST00000536871 KLK1P06870 262 aa13□□□□□ -0.33
SMG6-203ENST00000536871 ITGAMP11215 1152 aa13□□□□□ -0.33
SMG6-203ENST00000536871 NDUFS1P28331 727 aa13□□□□□ -0.33
SMG6-203ENST00000536871 GRK3P35626 688 aa13□□□□□ -0.33
SMG6-203ENST00000536871 HLCSP50747 726 aa13□□□□□ -0.33
SMG6-203ENST00000536871 TPD52P55327 224 aaPredicted RBP13□□□□□ -0.33
SMG6-203ENST00000536871 TAS2R50P59544 299 aa13□□□□□ -0.33
SMG6-203ENST00000536871 TMEM35AQ53FP2 167 aa13□□□□□ -0.33
SMG6-203ENST00000536871 GCNT6Q5T4J0 391 aa13□□□□□ -0.33
SMG6-203ENST00000536871 TBPL2Q6SJ96 375 aa13□□□□□ -0.33
SMG6-203ENST00000536871 GPR141Q7Z602 305 aa13□□□□□ -0.33
SMG6-203ENST00000536871 NUDT13Q86X67 352 aa13□□□□□ -0.33
SMG6-203ENST00000536871 OR2L8Q8NGY9 312 aa13□□□□□ -0.33
SMG6-203ENST00000536871 HDAC2Q92769 488 aaKnown RBP13□□□□□ -0.33
SMG6-203ENST00000536871 SCARF2Q96GP6 870 aaPredicted RBP13□□□□□ -0.33
SMG6-203ENST00000536871 FBXL20Q96IG2 436 aa13□□□□□ -0.33
SMG6-203ENST00000536871 CNDP2Q96KP4 475 aaKnown RBP13□□□□□ -0.33
SMG6-203ENST00000536871 FERD3LQ96RJ6 166 aa13□□□□□ -0.33
SMG6-203ENST00000536871 ZNF347Q96SE7 839 aa13□□□□□ -0.33
SMG6-203ENST00000536871 MENTQ9BUN1 341 aa13□□□□□ -0.33
SMG6-203ENST00000536871 NEUROD4Q9HD90 331 aa13□□□□□ -0.33
SMG6-203ENST00000536871 MBNL1Q9NR56 388 aaKnown RBP13□□□□□ -0.33
SMG6-203ENST00000536871 FAM118AQ9NWS6 357 aa13□□□□□ -0.33
SMG6-203ENST00000536871 ZFR2Q9UPR6 939 aaKnown RBP13□□□□□ -0.33
SMG6-203ENST00000536871 SH2B3Q9UQQ2 575 aa13□□□□□ -0.33
SMG6-203ENST00000536871 A0A1W2PRB8 838 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 CCDC160A6NGH7 325 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 FKBP9O95302 570 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 PAK4O96013 591 aaPredicted RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 ITGA2P17301 1181 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 DDCP20711 480 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 TIE1P35590 1138 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 ITGA1P56199 1179 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 GABARAPL2P60520 117 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 MRPS21P82921 87 aaKnown RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 PRDX1Q06830 199 aaKnown RBP12.99□□□□□ -0.33
SMG6-203ENST00000536871 SLC14A1Q13336 389 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 ZBED5Q49AG3 693 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 ADNP2Q6IQ32 1131 aa12.99□□□□□ -0.33
SMG6-203ENST00000536871 CCDC80Q76M96 950 aa12.99□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms