RNA–Protein interactions for RNA: ENST00000535871.1

CDCA3-205, Transcript of cell division cycle associated 3, humanhuman

TSL 5

Gene CDCA3, Length 454 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDCA3-205ENST00000535871 CPNE6O95741 557 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 IL6P05231 212 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 JUNP05412 331 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 IFI6P09912 130 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SLC35G6P0C7Q6 338 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 LINC00032P0C843 101 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 CKMT2P17540 419 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 ENGP17813 658 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 TSPAN8P19075 237 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 ACP1P24666 158 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 MAGEA8P43361 318 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 LIMK1P53667 647 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 MAZP56270 477 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 CLDN8P56748 225 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SRSF11Q05519 484 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 TBL3Q12788 808 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 BNIP3Q12983 259 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 FAM53BQ14153 422 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 RPS6KA2Q15349 733 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 FBXO48Q5FWF7 155 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 CATSPEREQ5SY80 951 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 KIAA1614Q5VZ46 1190 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 NOXRED1Q6NXP6 359 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 TMEM71Q6P5X7 295 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 LAYNQ6UX15 382 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 HACD2Q6Y1H2 254 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 LRRC69Q6ZNQ3 347 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 CCDC121Q6ZUS5 278 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 R3HCC1LQ7Z5L2 792 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SPRED1Q7Z699 444 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 GLRX5Q86SX6 157 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 MYLK4Q86YV6 388 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SPNS2Q8IVW8 549 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SAMD14Q8IZD0 417 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 CACTIN-AS1Q8N1I8 211 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 MINDY1Q8N5J2 469 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 FNDC5Q8NAU1 212 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 KYQ8NBH2 561 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 OR4D9Q8NGE8 314 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 PUM2Q8TB72 1066 aaKnown RBP eCLIP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 CREB3L4Q8TEY5 395 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 PATE1Q8WXA2 126 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 KLHL6Q8WZ60 621 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 PMEPA1Q969W9 287 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 GAL3ST3Q96A11 431 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 RGMAQ96B86 450 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 MOCOSQ96EN8 888 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 AHCYL2Q96HN2 611 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SLC41A2Q96JW4 573 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 APOLD1Q96LR9 279 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 C3orf30Q96M34 536 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 PRAP1Q96NZ9 151 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 FCRL4Q96PJ5 515 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 KCNC2Q96PR1 638 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 TRAPPC9Q96Q05 1148 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 KCNA7Q96RP8 456 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 PRPF18Q99633 342 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 XKR8Q9H6D3 395 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 WDR55Q9H6Y2 383 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 DDX31Q9H8H2 851 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 ACTR5Q9H9F9 607 aaPredicted RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SLC6A20Q9NP91 592 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 MS4A12Q9NXJ0 267 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SPHK1Q9NYA1 384 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 TAS2R7Q9NYW3 318 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 EHD3Q9NZN3 535 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 TAGLN3Q9UI15 199 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 MCM8Q9UJA3 840 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 PLAGL1Q9UM63 463 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SLC12A4Q9UP95 1085 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 AP3M1Q9Y2T2 418 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 PCDHGA1Q9Y5H4 931 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 COPG1Q9Y678 874 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 GMEB1Q9Y692 573 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 RNF215Q9Y6U7 377 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 SEC16AO15027 2179 aa6.21□□□□□ -1.42
CDCA3-205ENST00000535871 MDC1Q14676 2089 aaKnown RBP6.21□□□□□ -1.42
CDCA3-205ENST00000535871 RIF1Q5UIP0 2472 aaKnown RBP6.2□□□□□ -1.42
CDCA3-205ENST00000535871 RP1P56715 2156 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 RALGAPA1Q6GYQ0 2036 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 TMEM131Q92545 1883 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 KNTC1P50748 2209 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 LY6G6EA0A0G2JKS1 128 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 LNP1A1A4G5 178 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 FAM234BA2RU67 622 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 GSAPA4D1B5 854 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 E9PBE3 544 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 TRIM38O00635 465 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 FFAR3O14843 346 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 ANKRD28O15084 1053 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 CAPN5O15484 640 aaPredicted RBP6.2□□□□□ -1.42
CDCA3-205ENST00000535871 GPR42O15529 346 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 OR1F1O43749 312 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 KLHL41O60662 606 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 PEX11AO75192 247 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 SEC22BO75396 215 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 SLC22A3O75751 556 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 LMNAP02545 664 aaKnown RBP6.2□□□□□ -1.42
CDCA3-205ENST00000535871 KRT16P08779 473 aa6.2□□□□□ -1.42
CDCA3-205ENST00000535871 ALDOCP09972 364 aaKnown RBP6.2□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms