RNA–Protein interactions for RNA: ENST00000533455.5

CTSB-228, Transcript of cathepsin B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTSB, Length 2,009 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-228ENST00000533455 IL17RDQ8NFM7 739 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 MTERF1Q99551 399 aaKnown RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 FBXL12Q9NXK8 326 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 DUSP12Q9UNI6 340 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 YIPF1Q9Y548 306 aa15.99■□□□□ 0.15
CTSB-228ENST00000533455 CFAP20Q9Y6A4 193 aaKnown RBP15.99■□□□□ 0.15
CTSB-228ENST00000533455 A0A075B6Q4 140 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 SH3D21A4FU49 640 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 EFCAB10A6NFE3 127 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 E7EQ34 232 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 PSMD11O00231 422 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 TNFRSF21O75509 655 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 APOA1P02647 267 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 C1SP09871 688 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 ATP1B2P14415 290 aaPredicted RBP15.98■□□□□ 0.15
CTSB-228ENST00000533455 CDH12P55289 794 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 RBBP4Q09028 425 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 TAF12Q16514 161 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 SPANXN2Q5MJ10 180 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 AGAP6Q5VW22 663 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 CCDC80Q76M96 950 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 THOC6Q86W42 341 aaKnown RBP15.98■□□□□ 0.15
CTSB-228ENST00000533455 C1orf52Q8N6N3 182 aaKnown RBP15.98■□□□□ 0.15
CTSB-228ENST00000533455 GOT1L1Q8NHS2 421 aaPredicted RBP15.98■□□□□ 0.15
CTSB-228ENST00000533455 CXorf40BQ96DE9 158 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 AGAP4Q96P64 663 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 SDHCQ99643 169 aaPredicted RBP15.98■□□□□ 0.15
CTSB-228ENST00000533455 EHD3Q9NZN3 535 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 LRFN2Q9ULH4 789 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 TRAPPC4Q9Y296 219 aa15.98■□□□□ 0.15
CTSB-228ENST00000533455 CAB39Q9Y376 341 aaPredicted RBP15.98■□□□□ 0.15
CTSB-228ENST00000533455 KIAA0513O60268 411 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 GSTM1P09488 218 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 ANXA4P09525 319 aaPredicted RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 ZNF24P17028 368 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 ITGA2P17301 1181 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 NR4A2P43354 598 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 LIMS1P48059 325 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 GJA8P48165 433 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 KHDRBS1Q07666 443 aaKnown RBP eCLIP15.97■□□□□ 0.15
CTSB-228ENST00000533455 FCHO2Q0JRZ9 810 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 DDX39BQ13838 428 aaKnown RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 SF1Q15637 639 aaKnown RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 RNF180Q86T96 592 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 TMEM150AQ86TG1 271 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 SAPCD2Q86UD0 394 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 ATCAYQ86WG3 371 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 MMAAQ8IVH4 418 aaKnown RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 CYP4Z2PQ8N1L4 340 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 B3GNT7Q8NFL0 401 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 OR4A15Q8NGL6 344 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 CLP1Q92989 425 aaKnown RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 SLC22A12Q96S37 553 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 NUAK2Q9H093 628 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 MIR1-1HGQ9H1L0 117 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 NEK6Q9HC98 313 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 IMPAD1Q9NX62 359 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 MS4A12Q9NXJ0 267 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 ENOPH1Q9UHY7 261 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 ATP6V1HQ9UI12 483 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 PRAMEF25A6NGN4 478 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 HOXA2O43364 376 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 ABLIM3O94929 683 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 ETHE1O95571 254 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 OPN1SWP03999 348 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 PRKAR2AP13861 404 aaKnown RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 POLR2EP19388 210 aaKnown RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 TNFRSF1BP20333 461 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 CRISP3P54108 245 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 LMAN2Q12907 356 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 SPIN4Q56A73 249 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 GCNT6Q5T4J0 391 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 SERPINA13PQ6UXR4 307 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 NLGN4XQ8N0W4 816 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 CELF2-AS1Q8N7Q2 184 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 UTP15Q8TED0 518 aaKnown RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 BHMTQ93088 406 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 MAPKAP1Q9BPZ7 522 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 BHLHE41Q9C0J9 482 aaPredicted RBP15.97■□□□□ 0.15
CTSB-228ENST00000533455 ZNF556Q9HAH1 456 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 GPATCH2Q9NW75 528 aa15.97■□□□□ 0.15
CTSB-228ENST00000533455 ZW10O43264 779 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 MPZL2O60487 215 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 OLFM2O95897 454 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 MAGP20916 626 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 CBLP22681 906 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 TIA1P31483 386 aaKnown RBP eCLIP15.96■□□□□ 0.152e-8■■■□□ 15.1
CTSB-228ENST00000533455 XCR1P46094 333 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 SPINT3P49223 89 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 HMGA2P52926 109 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 CDC42P60953 191 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 SNRPD1P62314 119 aaKnown RBP15.96■□□□□ 0.15
CTSB-228ENST00000533455 SCARB2Q14108 478 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 OR52N2Q8NGI0 321 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 CAPSLQ8WWF8 208 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 TAPBPLQ9BX59 468 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 SUV39H2Q9H5I1 410 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 BRD9Q9H8M2 597 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 SGK2Q9HBY8 427 aa15.96■□□□□ 0.15
CTSB-228ENST00000533455 CRNNQ9UBG3 495 aaPredicted RBP15.96■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.8 ms