RNA–Protein interactions for RNA: ENST00000496711.5

GARNL3-220, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 1 (best)

Gene GARNL3, Length 1,859 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-220ENST00000496711 TAC3Q9UHF0 121 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 BLOC1S6Q9UL45 172 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 DNMT3AQ9Y6K1 912 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 TICRRQ7Z2Z1 1910 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 LAMA3Q16787 3333 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 BCKDKO14874 412 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 KMOO15229 486 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 B4GAT1O43505 415 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 GPR37L1O60883 481 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 ABCB7O75027 752 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 C6orf47O95873 294 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 ADH1BP00325 375 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 NTRK1P04629 796 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 KLK1P06870 262 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 SLC35G4P0C7Q5 338 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 HSD17B2P37059 387 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 WASP42768 502 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 MC1RQ01726 317 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 AGERQ15109 404 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 NEDD8Q15843 81 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 METRNLQ641Q3 311 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 NUDT18Q6ZVK8 323 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 CEP68Q76N32 757 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 C2orf73Q8N5S3 287 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF420Q8TAQ5 688 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 MAL2Q969L2 176 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 CIDECQ96AQ7 238 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 NRBF2Q96F24 287 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 TPD52L3Q96J77 140 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 CDCA3Q99618 268 aaPredicted RBP12.51□□□□□ -0.41
GARNL3-220ENST00000496711 SLC35A5Q9BS91 424 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 ACAT2Q9BWD1 397 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 TEX101Q9BY14 249 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 PLA2G2FQ9BZM2 168 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 TM7SF3Q9NS93 570 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 SPATA7Q9P0W8 599 aa12.51□□□□□ -0.41
GARNL3-220ENST00000496711 HEATR5BQ9P2D3 2071 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 KLHL33A6NCF5 533 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 GPR89AB7ZAQ6 455 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 SUV39H1O43463 412 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 KLHL18O94889 574 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 DIRAS1O95057 198 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 IL3P08700 152 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 GPR89BP0CG08 455 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 DCKP27707 260 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 CRATP43155 626 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 MVDP53602 400 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 CRYBA2P53672 197 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 CD47Q08722 323 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 TOP3AQ13472 1001 aaPredicted RBP12.5□□□□□ -0.41
GARNL3-220ENST00000496711 ENPP2Q13822 863 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 SKIV2LQ15477 1246 aaKnown RBP12.5□□□□□ -0.41
GARNL3-220ENST00000496711 MEP1AQ16819 746 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 CTU2Q2VPK5 515 aaKnown RBP12.5□□□□□ -0.41
GARNL3-220ENST00000496711 C6orf141Q5SZD1 244 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 IER5LQ5T953 404 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 ZNF852Q6ZMS4 543 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 NAGSQ8N159 534 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 PIK3C3Q8NEB9 887 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 OR52N2Q8NGI0 321 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 C12orf43Q96C57 262 aaKnown RBP12.5□□□□□ -0.41
GARNL3-220ENST00000496711 BARD1Q99728 777 aaKnown RBP12.5□□□□□ -0.41
GARNL3-220ENST00000496711 KXD1Q9BQD3 176 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 AIF1LQ9BQI0 150 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 TRIT1Q9H3H1 467 aaKnown RBP12.5□□□□□ -0.41
GARNL3-220ENST00000496711 IGFLR1Q9H665 355 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 WDR26Q9H7D7 661 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 REEP1Q9H902 201 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 TIMMDC1Q9NPL8 285 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 WASH6PQ9NQA3 447 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 SPASTQ9UBP0 616 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 EBF1Q9UH73 591 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 RAPGEFL1Q9UHV5 662 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 CDC14AQ9UNH5 594 aa12.5□□□□□ -0.41
GARNL3-220ENST00000496711 SAMHD1Q9Y3Z3 626 aaKnown RBP12.5□□□□□ -0.41
GARNL3-220ENST00000496711 CFAP20Q9Y6A4 193 aaKnown RBP12.5□□□□□ -0.41
GARNL3-220ENST00000496711 TRANK1O15050 2925 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 DPM1O60762 260 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 MITFO75030 526 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-220ENST00000496711 UGT2B11O75310 529 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 SEMA3DO95025 777 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 JUNBP17275 347 aaPredicted RBP12.49□□□□□ -0.41
GARNL3-220ENST00000496711 C5AR1P21730 350 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 CXCR2P25025 360 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 TEAD1P28347 426 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 AQP1P29972 269 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 RYKP34925 604 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 RPS6KA3P51812 740 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 ISL1P61371 349 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 KCNJ10P78508 379 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 CTBSQ01459 385 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 FADDQ13158 208 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 LAPTM4AQ15012 233 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 IRF4Q15306 451 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 MPEG1Q2M385 716 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 GCNT6Q5T4J0 391 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 KDM4DQ6B0I6 523 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 SLC9B2Q86UD5 537 aa12.49□□□□□ -0.41
GARNL3-220ENST00000496711 CYP4Z1Q86W10 505 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms