RNA–Protein interactions for RNA: ENST00000495039.1

VPS50-219, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 1,115 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-219ENST00000495039 CYB5D1Q6P9G0 228 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 LEKR1Q6ZMV7 388 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 SLC24A5Q71RS6 500 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 FCRLAQ7L513 359 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 GPC2Q8N158 579 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 GBP7Q8N8V2 638 aaPredicted RBP2.93□□□□□ -1.94
VPS50-219ENST00000495039 OR4C15Q8NGM1 316 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 P2RX5Q93086 422 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 AK8Q96MA6 479 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 GDAP1L1Q96MZ0 367 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 CITED2Q99967 270 aaPredicted RBP2.93□□□□□ -1.94
VPS50-219ENST00000495039 THUMPD3Q9BV44 507 aaKnown RBP2.93□□□□□ -1.94
VPS50-219ENST00000495039 HEXA-AS1Q9H8Q6 139 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 TSPAN16Q9UKR8 245 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 ELF5Q9UKW6 265 aaPredicted RBP2.93□□□□□ -1.94
VPS50-219ENST00000495039 PA2G4Q9UQ80 394 aaKnown RBP2.93□□□□□ -1.94
VPS50-219ENST00000495039 VSIG4Q9Y279 399 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 SELENOKQ9Y6D0 94 aa2.93□□□□□ -1.94
VPS50-219ENST00000495039 MYH14Q7Z406 1995 aaKnown RBP2.92□□□□□ -1.94
VPS50-219ENST00000495039 TRBV4-1A0A0J9YWV2 114 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 TMEM150CB9EJG8 249 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 F8VVB4 439 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 F8VWA3 439 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 FLRT2O43155 660 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 PPIP5K2O43314 1243 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 FCGR3BO75015 233 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 BAG3O95817 575 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 IGHEP01854 428 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 C9P02748 559 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 ZFYP08048 801 aaPredicted RBP2.92□□□□□ -1.94
VPS50-219ENST00000495039 KLK2P20151 261 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 SOX3P41225 446 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 SCN1BQ07699 218 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 FCHO2Q0JRZ9 810 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 CDH18Q13634 790 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 TMEM132DQ14C87 1099 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 TAZQ16635 292 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 CDO1Q16878 200 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 TWISTNBQ3B726 338 aaPredicted RBP2.92□□□□□ -1.94
VPS50-219ENST00000495039 LBHQ53QV2 105 aaPredicted RBP2.92□□□□□ -1.94
VPS50-219ENST00000495039 SUSD4Q5VX71 490 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 ARMC3Q5W041 872 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 TTC27Q6P3X3 843 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 DCLRE1AQ6PJP8 1040 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 FRRS1Q6ZNA5 592 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 CHMP1BQ7LBR1 199 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 ANKRD33Q7Z3H0 272 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 GALNTL5Q7Z4T8 443 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 CCDC60Q8IWA6 550 aaPredicted RBP2.92□□□□□ -1.94
VPS50-219ENST00000495039 C4orf19Q8IY42 314 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 APCDD1Q8J025 514 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 SIX6OS1Q8N1H7 587 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 LRTM2Q8N967 370 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 GRK7Q8WTQ7 553 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 NPRL2Q8WTW4 380 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 ST6GALNAC6Q969X2 333 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 FAM162AQ96A26 154 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 EXOC4Q96A65 974 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 ERO1AQ96HE7 468 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 ZIM3Q96PE6 472 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 INTS14Q96SY0 518 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 EGLN3Q9H6Z9 239 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 RAVER2Q9HCJ3 691 aaKnown RBP2.92□□□□□ -1.94
VPS50-219ENST00000495039 TNFRSF19Q9NS68 423 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 IL36AQ9UHA7 158 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 SLC12A6Q9UHW9 1150 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 RUVBL2Q9Y230 463 aaKnown RBP2.92□□□□□ -1.94
VPS50-219ENST00000495039 POMT1Q9Y6A1 747 aa2.92□□□□□ -1.94
VPS50-219ENST00000495039 TRAV18A0A075B6X5 111 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 C5orf52A6NGY3 159 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 SIX3O95343 332 aaPredicted RBP2.91□□□□□ -1.94
VPS50-219ENST00000495039 YES1P07947 543 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 HSP90AB1P08238 724 aaKnown RBP2.91□□□□□ -1.94
VPS50-219ENST00000495039 LBPP18428 481 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 AADACP22760 399 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 PSMB4P28070 264 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 OXTRP30559 389 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 SOAT1P35610 550 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 OR3A2P47893 321 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 DCDC1P59894 354 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 PTENP60484 403 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 RBP5P82980 135 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 IL10RBQ08334 325 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 CD300CQ08708 224 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 BFSP1Q12934 665 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 TAB1Q15750 504 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 C3AR1Q16581 482 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 TXNRD3NBQ6F5E7 133 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 NOTUMQ6P988 496 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 BAIAP2L2Q6UXY1 529 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 TMEM182Q6ZP80 229 aaPredicted RBP2.91□□□□□ -1.94
VPS50-219ENST00000495039 CPEB2Q7Z5Q1 589 aaKnown RBP2.91□□□□□ -1.94
VPS50-219ENST00000495039 PIGWQ7Z7B1 504 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 GLRX5Q86SX6 157 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 CROCCP3Q8IVE0 287 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 KLHL7Q8IXQ5 586 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 PRSS35Q8N3Z0 413 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 TCEANCQ8N8B7 351 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 KLHL30-AS1Q8NEE0 82 aa2.91□□□□□ -1.94
VPS50-219ENST00000495039 OR5T2Q8NGG2 359 aa2.91□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms