RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 HSD17B3P37058 310 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 PIK3CGP48736 1102 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 EMP2P54851 167 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 FOXL2P58012 376 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 STXBP1P61764 594 aaKnown RBP11.8□□□□□ -0.52
HMG20B-211ENST00000486028 KLC1Q07866 573 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 PCDH1Q08174 1060 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 CHIT1Q13231 466 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 ATP1A4Q13733 1029 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 PCBP2Q15366 365 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMG20B-211ENST00000486028 RBBP7Q16576 425 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 VWA2Q5GFL6 755 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 PRAMEF9Q5VWM5 478 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 PRSS41Q7RTY9 318 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 PPP1R32Q7Z5V6 425 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 TDRPQ86YL5 185 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP11.8□□□□□ -0.52
HMG20B-211ENST00000486028 PRSS58Q8IYP2 241 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 AFAP1L2Q8N4X5 818 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 CREB3L4Q8TEY5 395 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 FER1L6-AS2Q96M78 137 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 SLC6A16Q9GZN6 736 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 P4HTMQ9NXG6 502 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 COPG2Q9UBF2 871 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 XPR1Q9UBH6 696 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 C3orf18Q9UK00 162 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 ZNF490Q9ULM2 529 aaPredicted RBP11.8□□□□□ -0.52
HMG20B-211ENST00000486028 NAALAD2Q9Y3Q0 740 aa11.8□□□□□ -0.52
HMG20B-211ENST00000486028 TLN1Q9Y490 2541 aaKnown RBP11.8□□□□□ -0.52
HMG20B-211ENST00000486028 FFAR3O14843 346 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 GPR42O15529 346 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 CLEC3AO75596 197 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 WFS1O76024 890 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 TUBBP07437 444 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 GSTA1P08263 222 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 ZNF888P0CJ79 500 aaPredicted RBP11.79□□□□□ -0.52
HMG20B-211ENST00000486028 IL10P22301 178 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 HNF4AP41235 474 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 SLCO1A2P46721 670 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 CCL11P51671 97 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 SNRPNP63162 240 aaKnown RBP11.79□□□□□ -0.52
HMG20B-211ENST00000486028 MAT1AQ00266 395 aaKnown RBP11.79□□□□□ -0.52
HMG20B-211ENST00000486028 RASA2Q15283 850 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 DEFB134Q4QY38 66 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 TOR1AIP1Q5JTV8 583 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 MED27Q6P2C8 311 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 LAPTM4BQ86VI4 370 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 PTGR2Q8N8N7 351 aaPredicted RBP11.79□□□□□ -0.52
HMG20B-211ENST00000486028 OR51Q1Q8NH59 317 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 UTP15Q8TED0 518 aaKnown RBP11.79□□□□□ -0.52
HMG20B-211ENST00000486028 AENQ8WTP8 325 aaKnown RBP11.79□□□□□ -0.52
HMG20B-211ENST00000486028 CCT6BQ92526 530 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 CAVIN3Q969G5 261 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 PHF21BQ96EK2 531 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 PARD6BQ9BYG5 372 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 RHBGQ9H310 441 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 CLK4Q9HAZ1 481 aaKnown RBP11.79□□□□□ -0.52
HMG20B-211ENST00000486028 DCDC2Q9UHG0 476 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 G3BP2Q9UN86 482 aaKnown RBP11.79□□□□□ -0.52
HMG20B-211ENST00000486028 CCDC88CQ9P219 2028 aa11.79□□□□□ -0.52
HMG20B-211ENST00000486028 LRIT2A6NDA9 550 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 LRRC14BA6NHZ5 514 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 SMIM23A6NLE4 172 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 IDSB3KWA1 339 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 STX16-NPEPL1H3BU86 382 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 GOLGA8RI6L899 631 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 AGPSO00116 658 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 STX16O14662 325 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 PCDH17O14917 1159 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 GALR3O60755 368 aaPredicted RBP11.78□□□□□ -0.52
HMG20B-211ENST00000486028 CDH16O75309 829 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 RDH16O75452 317 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 SIX3O95343 332 aaPredicted RBP11.78□□□□□ -0.52
HMG20B-211ENST00000486028 BMP10O95393 424 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 HEXBP07686 556 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 KRT15P19012 456 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 CD22P20273 847 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 TAC1P20366 129 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 EEF1DP29692 281 aaKnown RBP11.78□□□□□ -0.52
HMG20B-211ENST00000486028 SERPINB1P30740 379 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 RAB8AP61006 207 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 IFFO1Q0D2I5 559 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 HYAL2Q12891 473 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 CHAF1BQ13112 559 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 GTF2H2Q13888 395 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 E2F2Q14209 437 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 SYT16Q17RD7 645 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 LIPJQ5W064 366 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 CPZQ66K79 652 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 GTF2H2CQ6P1K8 395 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 GOLGA7Q7Z5G4 137 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 PDSS2Q86YH6 399 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 TMEM151BQ8IW70 566 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 ZC3H7AQ8IWR0 971 aaKnown RBP11.78□□□□□ -0.52
HMG20B-211ENST00000486028 CLEC1AQ8NC01 280 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 C9orf43Q8TAL5 461 aaPredicted RBP11.78□□□□□ -0.52
HMG20B-211ENST00000486028 MZB1Q8WU39 189 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 ABHD17AQ96GS6 310 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 FAR2Q96K12 515 aa11.78□□□□□ -0.52
HMG20B-211ENST00000486028 SEMA4CQ9C0C4 833 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms