RNA–Protein interactions for RNA: ENST00000481300.1

CBX3-207, Transcript of chromobox 3, humanhuman

TSL 2

Gene CBX3, Length 559 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3-207ENST00000481300 VPS18Q9P253 973 aa3.37□□□□□ -1.87
CBX3-207ENST00000481300 DNAJB9Q9UBS3 223 aa3.37□□□□□ -1.87
CBX3-207ENST00000481300 SLC12A6Q9UHW9 1150 aa3.37□□□□□ -1.87
CBX3-207ENST00000481300 GMEB2Q9UKD1 530 aa3.37□□□□□ -1.87
CBX3-207ENST00000481300 PPP2R2CQ9Y2T4 447 aa3.37□□□□□ -1.87
CBX3-207ENST00000481300 NPHP3Q7Z494 1330 aa3.37□□□□□ -1.87
CBX3-207ENST00000481300 DCCP43146 1447 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 SSH2Q76I76 1423 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 IFT172Q9UG01 1749 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 LRRC7Q96NW7 1537 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 TRBV5-5A0A0J9YX44 114 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 MEIOCA2RUB1 952 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 OOEPA6NGQ2 149 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 SNURFLB1AK76 121 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 C2CD4DB7Z1M9 353 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 CCL24O00175 119 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 ZNF195O14628 629 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 TOM1O60784 492 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 KRT33AO76009 404 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 SEC24AO95486 1093 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 BAG3O95817 575 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 MOCS2O96007 188 aaPredicted RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 F3P13726 295 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 CEBPBP17676 345 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 SSTR1P30872 391 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 KRT2P35908 639 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 ATP12AP54707 1039 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 ZNF74Q16587 644 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 FGD3Q5JSP0 725 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 SUSD4Q5VX71 490 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 FAM166AQ6J272 317 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 PWWP2BQ6NUJ5 590 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 SLC25A47Q6Q0C1 308 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 Q6ZSR9 355 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 SLC24A5Q71RS6 500 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 FCRLAQ7L513 359 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 HOOK3Q86VS8 718 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 HOGA1Q86XE5 327 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 CCDC60Q8IWA6 550 aaPredicted RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 APCDD1Q8J025 514 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 GBP7Q8N8V2 638 aaPredicted RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 NHLRC2Q8NBF2 726 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 GDAP1Q8TB36 358 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 AFAP1L1Q8TED9 768 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 APOBEC4Q8WW27 367 aaKnown RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 PARK7Q99497 189 aaKnown RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 NDNQ99608 321 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 PNNQ9H307 717 aaKnown RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 PDRG1Q9NUG6 133 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 ATAD3AQ9NVI7 634 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 ERRFI1Q9UJM3 462 aaPredicted RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 CDH7Q9ULB5 785 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 MAP3K19Q56UN5 1328 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 CFAP65Q6ZU64 1925 aaKnown RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 ZNF142P52746 1687 aaPredicted RBP3.36□□□□□ -1.87
CBX3-207ENST00000481300 INSRP06213 1382 aa3.36□□□□□ -1.87
CBX3-207ENST00000481300 TRAV18A0A075B6X5 111 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 MSGN1A6NI15 193 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 PRSS46E5RG02 174 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 H0YAE9 185 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 SLC30A4O14863 429 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 TEX28O15482 410 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 SELENOFO60613 162 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 ZG16O60844 167 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 KHDRBS3O75525 346 aaKnown RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 TGDSO95455 350 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 RPL35AP18077 110 aaKnown RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 MUTP22033 750 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 TIA1P31483 386 aaKnown RBP eCLIP3.35□□□□□ -1.87
CBX3-207ENST00000481300 NPBWR1P48145 328 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 CRIP2P52943 208 aaPredicted RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 PAX9P55771 341 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 KRTAP10-5P60370 271 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 PMP22Q01453 160 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 FOLH1Q04609 750 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 YWHAHQ04917 246 aaPredicted RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 EXT1Q16394 746 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 ZFP69Q49AA0 526 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 FAM46CQ5VWP2 391 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 BHLHB9Q6PI77 547 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 BTNL8Q6UX41 500 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 BTN2A1Q7KYR7 527 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 OTOAQ7RTW8 1153 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 PTAR1Q7Z6K3 402 aaPredicted RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 PIGWQ7Z7B1 504 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 PRSS35Q8N3Z0 413 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 FAM89BQ8N5H3 189 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 LRTM2Q8N967 370 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 ADAD2Q8NCV1 583 aaKnown RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 OR6S1Q8NH40 331 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 MAPK15Q8TD08 544 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 SMAP2Q8WU79 429 aaPredicted RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 UBLCP1Q8WVY7 318 aaPredicted RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 CLEC7AQ9BXN2 247 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 NACAP1Q9BZK3 213 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 LSG1Q9H089 658 aaKnown RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 RAVER2Q9HCJ3 691 aaKnown RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 FGF22Q9HCT0 170 aa3.35□□□□□ -1.87
CBX3-207ENST00000481300 PHPT1Q9NRX4 125 aaPredicted RBP3.35□□□□□ -1.87
CBX3-207ENST00000481300 MAN2C1Q9NTJ4 1040 aa3.35□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms