RNA–Protein interactions for RNA: ENST00000478596.5

USP11-207, Transcript of ubiquitin specific peptidase 11, humanhuman

TSL 3

Gene USP11, Length 970 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP11-207ENST00000478596 CNDP1Q96KN2 507 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 CCDC138Q96M89 665 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 FAM111AQ96PZ2 611 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 PKP4Q99569 1192 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 C17orf62Q9BQA9 187 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 ACTR5Q9H9F9 607 aaPredicted RBP13.81□□□□□ -0.2
USP11-207ENST00000478596 TMEM216Q9P0N5 145 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 BTRCQ9Y297 605 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 PCM1Q15154 2024 aa13.81□□□□□ -0.2
USP11-207ENST00000478596 CCDC189A1A4V9 331 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 OR6C74A6NCV1 312 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 GFYI3L273 518 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 MYO1CO00159 1063 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 MASP2O00187 686 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 TPBGLP0DKB5 382 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 CRHR1P34998 444 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 RPA3P35244 121 aaPredicted RBP13.8□□□□□ -0.2
USP11-207ENST00000478596 PNLIPRP1P54315 467 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 SLC18A2Q05940 514 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 LTBQ06643 244 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 CDSNQ15517 529 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 TGFBIQ15582 683 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 PPP1R3AQ16821 1122 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 HHATQ5VTY9 493 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 AGAP7PQ5VUJ5 663 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 ZNF385CQ66K41 422 aaPredicted RBP13.8□□□□□ -0.2
USP11-207ENST00000478596 PPP1R32Q7Z5V6 425 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 TCAIMQ8N3R3 496 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 C2orf73Q8N5S3 287 aaPredicted RBP13.8□□□□□ -0.2
USP11-207ENST00000478596 ARMC2Q8NEN0 867 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 PPP1R14CQ8TAE6 165 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 RHEBL1Q8TAI7 183 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 TCP10LQ8TDR4 215 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 ZFPM2Q8WW38 1151 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 AGAP4Q96P64 663 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 SH3GL2Q99962 352 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 CNOT10Q9H9A5 744 aaKnown RBP13.8□□□□□ -0.2
USP11-207ENST00000478596 FANCEQ9HB96 536 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 MED4Q9NPJ6 270 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 CCDC177Q9NQR7 707 aaPredicted RBP13.8□□□□□ -0.2
USP11-207ENST00000478596 SEMA3GQ9NS98 782 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 STOX2Q9P2F5 926 aaPredicted RBP13.8□□□□□ -0.2
USP11-207ENST00000478596 TMCO1Q9UM00 188 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 ICKQ9UPZ9 632 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 ANGPTL3Q9Y5C1 460 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 NBEAL1Q6ZS30 2694 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 JMJD1CQ15652 2540 aa13.8□□□□□ -0.2
USP11-207ENST00000478596 TMEM120BA0PK00 339 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 ISM1B1AKI9 464 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 ZWINTO95229 277 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 SLC16A8O95907 504 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 MSL3P1P0C860 447 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 CREB1P16220 341 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 AGXTP21549 392 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 DNAJA1P31689 397 aaKnown RBP13.79□□□□□ -0.2
USP11-207ENST00000478596 HSD17B2P37059 387 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 TBPL1P62380 186 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 CSNK1G2P78368 415 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 INAQ16352 499 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 PFKFB4Q16877 469 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 CDHR3Q6ZTQ4 885 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 ISCA2Q86U28 154 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 PTGR2Q8N8N7 351 aaPredicted RBP13.79□□□□□ -0.2
USP11-207ENST00000478596 SNX31Q8N9S9 440 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 FBXO15Q8NCQ5 510 aaPredicted RBP13.79□□□□□ -0.2
USP11-207ENST00000478596 PPFIBP2Q8ND30 876 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 OR2Y1Q8NGV0 311 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 RDH11Q8TC12 318 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 TLCD1Q96CP7 247 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 ATOH8Q96SQ7 321 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 ATG10Q9H0Y0 220 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 C12orf65Q9H3J6 166 aaKnown RBP13.79□□□□□ -0.2
USP11-207ENST00000478596 EPS8L2Q9H6S3 715 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 SSU72Q9NP77 194 aaKnown RBP13.79□□□□□ -0.2
USP11-207ENST00000478596 SLC17A7Q9P2U7 560 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 TNFRSF10DQ9UBN6 386 aa13.79□□□□□ -0.2
USP11-207ENST00000478596 SNRNP200O75643 2136 aaKnown RBP13.79□□□□□ -0.2
USP11-207ENST00000478596 OR5K3A6NET4 321 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 C2orf74A8MZ97 194 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 TM9SF1O15321 606 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 CCNT2O60583 730 aaKnown RBP13.78□□□□□ -0.2
USP11-207ENST00000478596 PLIN3O60664 434 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 WDR47O94967 919 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 UNC5CO95185 931 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 PROCP04070 461 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 CD63P08962 238 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 POLR2CP19387 275 aaPredicted RBP13.78□□□□□ -0.2
USP11-207ENST00000478596 IMPA1P29218 277 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 FOLR3P41439 243 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 HSPA7P48741 367 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 HNMTP50135 292 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 IST1P53990 364 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 CDKL1Q00532 357 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 SRSF11Q05519 484 aaKnown RBP13.78□□□□□ -0.2
USP11-207ENST00000478596 ASPHQ12797 758 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 ARHGAP19Q14CB8 494 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 CYP2A13Q16696 494 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 FBXO48Q5FWF7 155 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 CFAP157Q5JU67 520 aa13.78□□□□□ -0.2
USP11-207ENST00000478596 SULT1C3Q6IMI6 304 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms