RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 IRAK1BP1Q5VVH5 260 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 GALNT17Q6IS24 598 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 TRNP1Q6NT89 227 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 MEX3BQ6ZN04 569 aaKnown RBP4.37□□□□□ -1.71
VPS50-214ENST00000477935 SLC9B2Q86UD5 537 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 IQCHQ86VS3 1027 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 KMT5CQ86Y97 462 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 CCDC83Q8IWF9 413 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 LMNTD1Q8N9Z9 388 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 PCYOX1LQ8NBM8 494 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 SMARCE1Q969G3 411 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 FAM149B1Q96BN6 582 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 RHBDF1Q96CC6 855 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 SPATA17Q96L03 361 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 TMEM68Q96MH6 324 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 CATSPER2Q96P56 530 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 SDF2L1Q9HCN8 221 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 DNAJC17Q9NVM6 304 aaKnown RBP4.37□□□□□ -1.71
VPS50-214ENST00000477935 THAP10Q9P2Z0 257 aaPredicted RBP4.37□□□□□ -1.71
VPS50-214ENST00000477935 POU2F3Q9UKI9 436 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 CPQQ9Y646 472 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 APCP25054 2843 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 KIAA1549LQ6ZVL6 1849 aa4.37□□□□□ -1.71
VPS50-214ENST00000477935 MYLKQ15746 1914 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 HEATR9A2RTY3 570 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 ASPDHA6ND91 283 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 ZNF840PA6NDX5 716 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 NEMP2A6NFY4 417 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 WASH3PC4AMC7 463 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 CYB561D2O14569 222 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 NVLO15381 856 aaKnown RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 GRID2O43424 1007 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 CACNG3O60359 315 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 LMX1BO60663 402 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 USO1O60763 962 aaKnown RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 RTN3O95197 1032 aaPredicted RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 TBX18O95935 607 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 SPARCP09486 303 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 CLTAP09496 248 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 CYP11B2P19099 503 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 TNFAIP3P21580 790 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 GNL1P36915 607 aaPredicted RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 FASLGP48023 281 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 F2RL1P55085 397 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 CDH8P55286 799 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 TBCEQ15813 527 aaPredicted RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 TSTQ16762 297 aaKnown RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 KRTAP24-1Q3LI83 254 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 BRAT1Q6PJG6 821 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 GDPD4Q6W3E5 623 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 DSG4Q86SJ6 1040 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 NRROSQ86YC3 692 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 TMEM25Q86YD3 366 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 FAM114A1Q8IWE2 563 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 CD302Q8IX05 232 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 DIS3L2Q8IYB7 885 aaKnown RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP4.36□□□□□ -1.71
VPS50-214ENST00000477935 TMEM116Q8NCL8 245 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 STKLD1Q8NE28 680 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 OR2T3Q8NH03 318 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 OR4C6Q8NH72 309 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 OR14L1PQ8NHC6 308 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 C9orf43Q8TAL5 461 aaPredicted RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 HMGCLL1Q8TB92 370 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 MAPK15Q8TD08 544 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 KIFAP3Q92845 792 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 RRNAD1Q96FB5 475 aaKnown RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 PERPQ96FX8 193 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 HARBI1Q96MB7 349 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 EPYCQ99645 322 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 ACBD6Q9BR61 282 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 FUCA2Q9BTY2 467 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 SLC26A6Q9BXS9 759 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 CCSER1Q9C0I3 900 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 LHX5Q9H2C1 402 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 TMEM245Q9H330 911 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 CNOT8Q9UFF9 292 aaKnown RBP4.36□□□□□ -1.71
VPS50-214ENST00000477935 TUBGCP4Q9UGJ1 667 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 SCML1Q9UN30 329 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 NCKAP1Q9Y2A7 1128 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 SLCO1B1Q9Y6L6 691 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 MYO16Q9Y6X6 1858 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 NBEAL1Q6ZS30 2694 aa4.36□□□□□ -1.71
VPS50-214ENST00000477935 AKAP9Q99996 3911 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 A0A1W2PR77 199 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 A0A1W2PS18 150 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 TTC26A0AVF1 554 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 LRRC72A6NJI9 287 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 C16orf97H3BN30 126 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 PIRO00625 290 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 CLDN3O15551 220 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 SPINT2O43291 252 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 TOM1L1O75674 476 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 CLDN1O95832 211 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 OAS1P00973 400 aaKnown RBP4.35□□□□□ -1.71
VPS50-214ENST00000477935 CRYAAP02489 173 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 DNTTP04053 509 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 EDN1P05305 212 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 CLEC3BP05452 202 aa4.35□□□□□ -1.71
VPS50-214ENST00000477935 IGHV4-34P06331 123 aa4.35□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms