RNA–Protein interactions for RNA: ENST00000464577.1

USP48-206, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 2

Gene USP48, Length 2,089 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-206ENST00000464577 HHATLQ9HCP6 504 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RLIMQ9NVW2 624 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ARL15Q9NXU5 204 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 TAS2R16Q9NYV7 291 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 FLRT1Q9NZU1 646 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 FTSJ1Q9UET6 329 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 PADI3Q9ULW8 664 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 STUB1Q9UNE7 303 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RUVBL1Q9Y265 456 aaKnown RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 KLHL20Q9Y2M5 609 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 BOLA1Q9Y3E2 137 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 HYKKA2RU49 373 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 B4DXG7 233 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 SCAMP2O15127 329 aaKnown RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 TSPAN3O60637 253 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 UGDHO60701 494 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CD160O95971 181 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 C8GP07360 202 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ADRA2AP08913 450 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 NUDT7P0C024 238 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 JUPP14923 745 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ATF6P18850 670 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CBLP22681 906 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 MYL9P24844 172 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 PKLRP30613 574 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CD52P31358 61 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CSTF2P33240 577 aaKnown RBP eCLIP7.02□□□□□ -1.29
USP48-206ENST00000464577 NUDT1P36639 197 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ASMTP46597 345 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RPIAP49247 311 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 HNMTP50135 292 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 HMGA2P52926 109 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CDH12P55289 794 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RPS24P62847 133 aaKnown RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 ARF5P84085 180 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RUNX1T1Q06455 604 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RBBP4Q09028 425 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 FCHO2Q0JRZ9 810 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 SMUG1Q53HV7 270 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 Q5BKY6 102 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 TMEM201Q5SNT2 666 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 MORN1Q5T089 497 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 SLC35F1Q5T1Q4 408 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ARMC12Q5T9G4 340 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ANXA8L1Q5VT79 327 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ZNF783Q6ZMS7 281 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ZNF598Q86UK7 904 aaKnown RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 SERINC5Q86VE9 423 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 LAX1Q8IWV1 398 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 SUN5Q8TC36 379 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 COQ8BQ96D53 544 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 REPS1Q96D71 796 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ZFYVE19Q96K21 471 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 MSLNLQ96KJ4 702 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 DUSP26Q9BV47 211 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 SLC12A9Q9BXP2 914 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 EBPLQ9BY08 206 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ROGDIQ9GZN7 287 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 IRF2BPLQ9H1B7 796 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 CWH43Q9H720 699 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RNF121Q9H920 327 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 SLC25A19Q9HC21 320 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 RANGRFQ9HD47 186 aaPredicted RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 ABCB8Q9NUT2 735 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 NDUFB11Q9NX14 153 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 SH3BP4Q9P0V3 963 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 ZNF282Q9UDV7 671 aaPredicted RBP7.02□□□□□ -1.29
USP48-206ENST00000464577 HCN4Q9Y3Q4 1203 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 TRPM7Q96QT4 1865 aa7.02□□□□□ -1.29
USP48-206ENST00000464577 TTC3P53804 2025 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 A0A1B0GVM2 712 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 OR6C75A6NL08 312 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 SYN3O14994 580 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 SLC16A5O15375 505 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 YY2O15391 372 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 RGS5O15539 181 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 NBNO60934 754 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 PRAMEF12O95522 483 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 IL1AP01583 271 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 LAMP1P11279 417 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 HLA-EP13747 358 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 PSMA1P25786 263 aaKnown RBP7.01□□□□□ -1.29
USP48-206ENST00000464577 AOAHP28039 575 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 CRYBB2P43320 205 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 PTPN5P54829 565 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 AP1S1P61966 158 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 SNRPGP62308 76 aaKnown RBP7.01□□□□□ -1.29
USP48-206ENST00000464577 FAM189BP81408 668 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 DSC1Q08554 894 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 TWF1Q12792 350 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 MAP2K5Q13163 448 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 SP140Q13342 867 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 TNK1Q13470 666 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 GAB1Q13480 694 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 TP53BP2Q13625 1128 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 DOC2BQ14184 412 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 LARS2Q15031 903 aaKnown RBP7.01□□□□□ -1.29
USP48-206ENST00000464577 PTGES3Q15185 160 aaKnown RBP7.01□□□□□ -1.29
USP48-206ENST00000464577 ZMAT1Q5H9K5 638 aa7.01□□□□□ -1.29
USP48-206ENST00000464577 CCNJQ5T5M9 372 aa7.01□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 10.5 ms