RNA–Protein interactions for RNA: ENST00000446425.2

UBXN2A-203, Transcript of UBX domain protein 2A, humanhuman

TSL 1 (best)

Gene UBXN2A, Length 2,195 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN2A-203ENST00000446425 CDRT1O95170 752 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 CLDN9O95484 217 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 MMP3P08254 477 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 PRPH2P23942 346 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 ATN1P54259 1190 aaPredicted RBP16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 ARPP19P56211 112 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 DSC3Q14574 896 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 PTGES3Q15185 160 aaKnown RBP16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 SPHARQ15513 63 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 TIGD5Q53EQ6 642 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 ZNF648Q5T619 568 aaPredicted RBP16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 FBXL22Q6P050 247 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 PTCHD4Q6ZW05 846 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 METTL23Q86XA0 190 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 C9orf62Q8N4C0 152 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 C19orf18Q8NEA5 215 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 TTC16Q8NEE8 873 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 SPPL2AQ8TCT8 520 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 CMTM7Q96FZ5 175 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 MGME1Q9BQP7 344 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 ARHGAP39Q9C0H5 1083 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 PDFQ9HBH1 243 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 PLEKHB1Q9UF11 243 aaPredicted RBP16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 CPA4Q9UI42 421 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 ELF5Q9UKW6 265 aaPredicted RBP16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 SLC6A14Q9UN76 642 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 PCDHB1Q9Y5F3 818 aa16.27■□□□□ 0.2
UBXN2A-203ENST00000446425 PTPRDP23468 1912 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 TRIM77I1YAP6 450 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 SLC43A1O75387 559 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 ODC1P11926 461 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 BRCC3P46736 316 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 CLDN20P56880 219 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 SELENOWP63302 87 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 SRSF11Q05519 484 aaKnown RBP16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 FAM122CQ6P4D5 195 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 LRRTM3Q86VH5 581 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 DNAJB3Q8WWF6 145 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 GPR137Q96N19 417 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 ABHD16BQ9H3Z7 469 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 SLC25A19Q9HC21 320 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 KCNE2Q9Y6J6 123 aa16.27■□□□□ 0.19
UBXN2A-203ENST00000446425 ALPK3Q96L96 1907 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 SMLR1H3BR10 107 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 PITPNM1O00562 1244 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 CSO75390 466 aaKnown RBP16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 RFPL3O75679 317 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 SCO1O75880 301 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 THP07101 528 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 PRKAR1AP10644 381 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 OR1E1P30953 314 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 RGS4P49798 205 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 PER3P56645 1201 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 SPIBQ01892 262 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 EXOC3L2Q2M3D2 409 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 MEDAGQ5VYS4 303 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 HDDC2Q7Z4H3 204 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 OR9Q1Q8NGQ5 310 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 SELENOMQ8WWX9 145 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 SAMD11Q96NU1 681 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 QRFPRQ96P65 431 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 MARVELD1Q9BSK0 173 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 FZD3Q9NPG1 666 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 MCUBQ9NWR8 336 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 MRPL39Q9NYK5 338 aaKnown RBP16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 NDRG2Q9UN36 371 aaKnown RBP16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 PCDHGB7Q9Y5F8 929 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 MBLAC1A4D2B0 266 aaPredicted RBP16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 PRR23AA6NEV1 266 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 ZAR1LA6NP61 321 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 H7C0S8 307 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 SCN2BO60939 215 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 IGHA2P01877 340 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 FAM157BP0CG42 384 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 ACPPP15309 386 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 TNNI3P19429 210 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 PRPS1L1P21108 318 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 CDH12P55289 794 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 WNT3P56703 355 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 FAM189BP81408 668 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 MXD1Q05195 221 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 HNRNPA0Q13151 305 aaKnown RBP16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 NCF4Q15080 339 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 CPSF6Q16630 551 aaKnown RBP eCLIP16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 WSCD2Q2TBF2 565 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 RASAL3Q86YV0 1011 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 FAM217AQ8IXS0 508 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 OR52J3Q8NH60 311 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 MND1Q9BWT6 205 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 CHST8Q9H2A9 424 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 PCDHB11Q9Y5F2 797 aa16.26■□□□□ 0.19
UBXN2A-203ENST00000446425 C11orf97A0A1B0GVM6 126 aaPredicted RBP16.25■□□□□ 0.19
UBXN2A-203ENST00000446425 ORC5O43913 435 aa16.25■□□□□ 0.19
UBXN2A-203ENST00000446425 TPST2O60704 377 aa16.25■□□□□ 0.19
UBXN2A-203ENST00000446425 PRLP01236 227 aa16.25■□□□□ 0.19
UBXN2A-203ENST00000446425 SMIM10L2AP0DMW4 78 aa16.25■□□□□ 0.19
UBXN2A-203ENST00000446425 SMIM10L2BP0DMW5 78 aa16.25■□□□□ 0.19
UBXN2A-203ENST00000446425 CKMT1AP12532 417 aa16.25■□□□□ 0.19
UBXN2A-203ENST00000446425 RPS3P23396 243 aaKnown RBP eCLIP16.25■□□□□ 0.19
UBXN2A-203ENST00000446425 PCGF2P35227 344 aa16.25■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 68.3 ms