RNA–Protein interactions for RNA: ENST00000446155.1

HMGB1P48-201, Transcript of high mobility group box 1 pseudogene 48, humanhuman

BASIC

Gene HMGB1P48, Length 598 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P48-201ENST00000446155 CSF2RAP15509 400 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 AMD1P17707 334 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 JAK1P23458 1154 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 HSPA1LP34931 641 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 FMO5P49326 533 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 CHIT1Q13231 466 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 GK2Q14410 553 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 KIR2DS5Q14953 304 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 RBBP7Q16576 425 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 UGT3A2Q3SY77 523 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 KIAA1217Q5T5P2 1943 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 ERCC6L2Q5T890 1561 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 IRAK1BP1Q5VVH5 260 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 CENPPQ6IPU0 288 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 LINGO4Q6UY18 593 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 KCTD8Q6ZWB6 473 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 ANKRD33Q7Z3H0 272 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZNF573Q86YE8 665 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 CROCCP3Q8IVE0 287 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 GBGT1Q8N5D6 347 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 CPSF7Q8N684 471 aaKnown RBP4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 RNF148Q8N7C7 305 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 MAB21L3Q8N8X9 362 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 LEMD2Q8NC56 503 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 NPEPL1Q8NDH3 523 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR4A16Q8NH70 328 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 SELENOMQ8WWX9 145 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 GGHQ92820 318 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 PGM2Q96G03 612 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 LMLNQ96KR4 655 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 C17orf77Q96MU5 243 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 VN1R1Q9GZP7 353 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 PALMDQ9NP74 551 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 PHPT1Q9NRX4 125 aaPredicted RBP4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 PKD2L2Q9NZM6 624 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 NDUFA13Q9P0J0 144 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 SH3GLB1Q9Y371 365 aa4.08□□□□□ -1.76
HMGB1P48-201ENST00000446155 SYNJ2O15056 1496 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 FANCD2Q9BXW9 1451 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CCDC169A6NNP5 214 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 PRR32B1ATL7 298 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 PRR23D1E9PI22 279 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 C16orf97H3BN30 126 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 PSMD3O43242 534 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CTSVO60911 334 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 SPAG6O75602 509 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 IDH1O75874 414 aaKnown RBP4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR6A2O95222 327 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 PCCBP05166 539 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 H1F0P07305 194 aaKnown RBP4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 PRR23D2P0DMB1 279 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 THRBP10828 461 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 PSMA5P28066 241 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 SSTR1P30872 391 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 PEX19P40855 299 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 IRX4P78413 519 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CACNG1Q06432 222 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZNF415Q09FC8 603 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 RASGEF1BQ0VAM2 473 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CETN1Q12798 172 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZKSCAN8Q15776 578 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 RABL6Q3YEC7 729 aaPredicted RBP4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 BOLA3Q53S33 107 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 SIRPB2Q5JXA9 342 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 LDLRAP1Q5SW96 308 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CCDC183Q5T5S1 534 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 LYSMD4Q5XG99 296 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 PIWIL4Q7Z3Z4 852 aaKnown RBP4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 GPR141Q7Z602 305 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 NUDT13Q86X67 352 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 STHQ8IWL8 128 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 MMD2Q8IY49 270 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 THEM5Q8N1Q8 247 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CCDC63Q8NA47 563 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR4K1Q8NGD4 311 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR52M1Q8NGK5 317 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 OR13J1Q8NGT2 312 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 WBP2Q969T9 261 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CCDC51Q96ER9 411 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 SCRN2Q96FV2 425 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 ABHD8Q96I13 439 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 TSSK2Q96PF2 358 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 EGLN1Q9GZT9 426 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 WWTR1Q9GZV5 400 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 SIRPDQ9H106 197 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 ZFP57Q9NU63 452 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CNOT2Q9NZN8 540 aaKnown RBP4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 CLIP2Q9UDT6 1046 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 FAM153AQ9UHL3 310 aa4.07□□□□□ -1.76
HMGB1P48-201ENST00000446155 NCAPD2Q15021 1401 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 SYNRGQ9UMZ2 1314 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 IGLV5-45A0A087WSX0 123 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 A0A1W2PPI3 338 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 NPIPA3F8WFD2 350 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 GAPDHSO14556 408 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 SCO2O43819 266 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 PRKNO60260 465 aaPredicted RBP4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 TSC22D2O75157 780 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 TFAP2AP05549 437 aa4.06□□□□□ -1.76
HMGB1P48-201ENST00000446155 ACP2P11117 423 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms