RNA–Protein interactions for RNA: ENST00000438745.1

HMGB3P12-201, Transcript of high mobility group box 3 pseudogene 12, humanhuman

BASIC

Gene HMGB3P12, Length 556 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P12-201ENST00000438745 SH2D5Q6ZV89 423 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 ERN2Q76MJ5 926 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MMD2Q8IY49 270 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 THNSL1Q8IYQ7 743 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 LGI2Q8N0V4 545 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 VANGL1Q8TAA9 524 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 SETD6Q8TBK2 473 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 EXT2Q93063 718 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 ARSGQ96EG1 525 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 FAM20AQ96MK3 541 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 RAB3IPQ96QF0 476 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MIS12Q9H081 205 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 CDH20Q9HBT6 801 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 XAB2Q9HCS7 855 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 SIX2Q9NPC8 291 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 SDR39U1Q9NRG7 319 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF701Q9NV72 531 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 FRMD4AQ9P2Q2 1039 aaPredicted RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 KCNJ14Q9UNX9 436 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 TNNQ9UQP3 1299 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 WDR83OSQ9Y284 106 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 KCNK7Q9Y2U2 307 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 USP16Q9Y5T5 823 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 DDX60Q8IY21 1712 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MAP1BP46821 2468 aaKnown RBP2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MAST2Q6P0Q8 1798 aa2.95□□□□□ -1.94
HMGB3P12-201ENST00000438745 MAP3K15Q6ZN16 1313 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 UBN2Q6ZU65 1347 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 STK36Q9NRP7 1315 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 FAM186AA6NE01 2351 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 IGKV3D-15A0A087WSY6 115 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 A0A1B0GVY2 172 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 ENO4A6NNW6 628 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 KRTAP16-1A8MUX0 517 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 ERVV-1B6SEH8 477 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 TCP10L2B9ZVM9 353 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 RNASEH1O60930 286 aaKnown RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 PRKRAO75569 313 aaKnown RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 TRMUO75648 421 aaKnown RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 DDHD2O94830 711 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 NADKO95544 446 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 TIMP1P01033 207 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 CA3P07451 260 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 FRMD6-AS1P0C7T7 363 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 SAGP10523 405 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 KRT5P13647 590 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 IRF2P14316 349 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 DARSP14868 501 aaKnown RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 CD27P26842 260 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 LUMP51884 338 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 IRX6P78412 446 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 GCNT1Q02742 428 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 ITGA9Q13797 1035 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF273Q14593 569 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 TAF13Q15543 124 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 GTDC1Q4AE62 458 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 XKR3Q5GH77 459 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 SLC10A5Q5PT55 438 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 ZNF497Q6ZNH5 498 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 SLC16A9Q7RTY1 509 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 GALNTL5Q7Z4T8 443 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 OR4K1Q8NGD4 311 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 PHLDA1Q8WV24 401 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 KCNE4Q8WWG9 221 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 PROX1Q92786 737 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 EXOC4Q96A65 974 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 FAM71F1Q96KD3 344 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 SPATA17Q96L03 361 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 FERMT1Q9BQL6 677 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 MGME1Q9BQP7 344 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 DNAJC4Q9NNZ3 241 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 FAM207AQ9NSI2 230 aaPredicted RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 P4HTMQ9NXG6 502 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 STUB1Q9UNE7 303 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 PRSS21Q9Y6M0 314 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 ROCK2O75116 1388 aaKnown RBP2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 CEMIPQ8WUJ3 1361 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 LAMB1P07942 1786 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 PLXNA3P51805 1871 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 WDFY4Q6ZS81 3184 aa2.94□□□□□ -1.94
HMGB3P12-201ENST00000438745 ASH1LQ9NR48 2969 aaKnown RBP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 TRAV34A0A0B4J273 112 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 A0A1W2PN81 502 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 A0A1W2PPK0 400 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 EPOPA6NHQ4 379 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 ATP6V0E1O15342 81 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 CSN3P07498 182 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 GLULP15104 373 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 TCF4P15884 667 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 EFNA1P20827 205 aaPredicted RBP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 ACAT1P24752 427 aaKnown RBP2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 CHRNA7P36544 502 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 GP5P40197 560 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 CAPZA1P52907 286 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 LIMK1P53667 647 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 GSDMDP57764 484 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 CDR2Q01850 454 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 TFCP2Q12800 502 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 GPR17Q13304 367 aa2.93□□□□□ -1.94
HMGB3P12-201ENST00000438745 HERC3Q15034 1050 aa2.93□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms