RNA–Protein interactions for RNA: ENST00000413987.1

SNHG3-201, Transcript of small nucleolar RNA host gene 3, humanhuman

TSL 1 (best)

Gene SNHG3, Length 2,201 nt, Biotype retained intron, Subcellular localisation Cytoplasm .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG3-201ENST00000413987 ZNF461Q8TAF7 563 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 SLCO4A1Q96BD0 722 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 SF3B5Q9BWJ5 86 aaKnown RBP9.06□□□□□ -0.96
SNHG3-201ENST00000413987 BHLHE41Q9C0J9 482 aaPredicted RBP9.06□□□□□ -0.96
SNHG3-201ENST00000413987 WDR55Q9H6Y2 383 aaPredicted RBP9.06□□□□□ -0.96
SNHG3-201ENST00000413987 NANOGQ9H9S0 305 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 SMOXQ9NWM0 555 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 BTBD3Q9Y2F9 522 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 TCAF1Q9Y4C2 921 aa9.06□□□□□ -0.96
SNHG3-201ENST00000413987 BPTFQ12830 3046 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 A0A1W2PN81 502 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 TRPC5OSA6NMA1 111 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 G3V2L1 256 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 FAM72CH0Y354 149 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 RFXAPO00287 272 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SOCS2O14508 198 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 PRRG1O14668 218 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CLOCKO15516 846 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 THRBP10828 461 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 PTX3P26022 381 aaPredicted RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SPRP35270 261 aaPredicted RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CHRNA7P36544 502 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CAPGP40121 348 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 NRIP1P48552 1158 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CAPZA1P52907 286 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 TSPAN5P62079 268 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CYP4F3Q08477 520 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 TWF1Q12792 350 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 INPP5AQ14642 412 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 UGP2Q16851 508 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 C6orf183Q5T699 404 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 FAM72AQ5TYM5 149 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 FAM72DQ6L9T8 149 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CES3Q6UWW8 571 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 THSD4Q6ZMP0 1018 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 ERN2Q76MJ5 926 aaKnown RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 FAM72BQ86X60 149 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 DHFR2Q86XF0 187 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 MIB1Q86YT6 1006 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 FAM20CQ8IXL6 584 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CADM3Q8N126 398 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 ATP6V0D2Q8N8Y2 350 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 OR52E1Q8NGJ3 308 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SPPL2BQ8TCT7 592 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 KAT2AQ92830 837 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 PLPPR2Q96GM1 343 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 MYRFLQ96LU7 910 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 NPY6RQ99463 290 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 NPAS2Q99743 824 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 PRR14Q9BWN1 585 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 BOCQ9BWV1 1114 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 PBX4Q9BYU1 374 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 IL22Q9GZX6 179 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 DHX35Q9H5Z1 703 aaKnown RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SP110Q9HB58 689 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SPAG4Q9NPE6 437 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 UXTQ9UBK9 157 aaPredicted RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 MSRAQ9UJ68 235 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 PTRH2Q9Y3E5 179 aaKnown RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 YIPF1Q9Y548 306 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 GREB1Q4ZG55 1949 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 A0A075B6Q4 140 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 EPOPA6NHQ4 379 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SLC38A8A6NNN8 435 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 TMX2-CTNND1H3BSU7 103 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 KLK10O43240 276 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SEC14L2O76054 403 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 HMBSP08397 361 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CTSAP10619 480 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 PTPN9P43378 593 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SPIBQ01892 262 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CLCA4Q14CN2 919 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 CCNYL2Q5T2Q4 361 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 AFMIDQ63HM1 303 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 HACD2Q6Y1H2 254 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 MACC1Q6ZN28 852 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 EFL1Q7Z2Z2 1120 aaKnown RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 ITIH5Q86UX2 942 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 FJX1Q86VR8 437 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 MMAAQ8IVH4 418 aaKnown RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 OR2T3Q8NH03 318 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 SH3YL1Q96HL8 342 aaPredicted RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 OR1F2PQ96R84 312 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 INTS14Q96SY0 518 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 GATA5Q9BWX5 397 aaPredicted RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 FAM212BQ9NTI7 297 aaPredicted RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 DAPP1Q9UN19 280 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 NOX1Q9Y5S8 564 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 COPG1Q9Y678 874 aaKnown RBP9.05□□□□□ -0.96
SNHG3-201ENST00000413987 PLXNA3P51805 1871 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 TRIOBPQ9H2D6 2365 aa9.05□□□□□ -0.96
SNHG3-201ENST00000413987 A0A1B0GTQ1 180 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 ZNF487B1APH4 448 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 CENPBD1B2RD01 187 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 E7ENX8 843 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 GRID2O43424 1007 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 RFPL2O75678 378 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 KRT75O95678 551 aa9.04□□□□□ -0.96
SNHG3-201ENST00000413987 MOCS2O96007 188 aaPredicted RBP9.04□□□□□ -0.96
SNHG3-201ENST00000413987 MBL2P11226 248 aaPredicted RBP9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms