RNA–Protein interactions for RNA: ENST00000413852.5

SEMA3F-202, Transcript of semaphorin 3F, humanhuman

TSL 1 (best) BASIC

Gene SEMA3F, Length 3,212 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3F-202ENST00000413852 PRAMEF10O60809 474 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 CELF2O95319 508 aaKnown RBP14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 APOA1P02647 267 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 WEE1P30291 646 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 OR1D2P34982 312 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 MAGEA11P43364 429 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 MEF2AQ02078 507 aaPredicted RBP14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 PRKCDQ05655 676 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 POM121L1PQ3SYA9 428 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 ZFP69Q49AA0 526 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 EEF1AKMT2Q5JPI9 291 aaKnown RBP14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 ADGRF1Q5T601 910 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 TMIGD1Q6UXZ0 262 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 CERS6Q6ZMG9 384 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 OLIG3Q7RTU3 272 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 REM2Q8IYK8 340 aaPredicted RBP14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 UBQLNLQ8IYU4 475 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 OR4A15Q8NGL6 344 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 SCAMP4Q969E2 229 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 FAM129BQ96TA1 746 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 PKP4Q99569 1192 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 TMPRSS11EQ9UL52 423 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 PCDHGB3Q9Y5G1 929 aa14.02□□□□□ -0.16
SEMA3F-202ENST00000413852 PLXNA3P51805 1871 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 GNG14A0A1W2PPG7 69 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 GASTP01350 101 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 SRCP12931 536 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 GABRB1P18505 474 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 IL1RNP18510 177 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 CSNK1DP48730 415 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 ZNF45Q02386 682 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 BCL2L1Q07817 233 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 DGKKQ5KSL6 1271 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 HECTD3Q5T447 861 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 CCDC190Q86UF4 302 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 ATCAYQ86WG3 371 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 GALNT12Q8IXK2 581 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 ELMOD1Q8N336 334 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 KBTBD8Q8NFY9 601 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 SLC30A2Q9BRI3 323 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 ASPNQ9BXN1 380 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 GABARAPL3Q9BY60 117 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 NXF2Q9GZY0 626 aaKnown RBP14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 ASIC5Q9NY37 505 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 KLHL20Q9Y2M5 609 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 PCDHB11Q9Y5F2 797 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 A0A1W2PQ09 198 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 SMLR1H3BR10 107 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 CCRL2O00421 344 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 CCND3P30281 292 aaPredicted RBP14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 PFN3P60673 137 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 PRSS53Q2L4Q9 553 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 CCDC58Q4VC31 144 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 RPS26P11Q5JNZ5 115 aaPredicted RBP14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 LINC00299Q6ZSB3 139 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 AQP11Q8NBQ7 271 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 UBASH3BQ8TF42 649 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 ASB15Q8WXK1 588 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 COL21A1Q96P44 957 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 NRTNQ99748 197 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 DOHHQ9BU89 302 aa14.02□□□□□ -0.17
SEMA3F-202ENST00000413852 NOTOA8MTQ0 251 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 TPD52L2O43399 206 aaKnown RBP14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ENTPD6O75354 484 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 C6orf47O95873 294 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ANXA4P09525 319 aaPredicted RBP14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 SDHBP21912 280 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 PREPP48147 710 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 HBA1P69905 142 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 RAE1P78406 368 aaKnown RBP14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 LSM11P83369 360 aaKnown RBP eCLIP14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 GPR17Q13304 367 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 CDH18Q13634 790 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 DOC2AQ14183 400 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ZNF79Q15937 498 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 CDKN3Q16667 212 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 C5orf22Q49AR2 442 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ARMC4Q5T2S8 1044 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 MFSD4BQ5TF39 518 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 CRTC1Q6UUV9 634 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 C17orf50Q8WW18 174 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ASIC4Q96FT7 647 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 DEPDC7Q96QD5 511 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 WFDC6Q9BQY6 131 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 SLC29A3Q9BZD2 475 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ABCB9Q9NP78 766 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 RAB23Q9ULC3 237 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 TPST2O60704 377 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 PRPS1L1P21108 318 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 LHCGRP22888 699 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 SMAD3P84022 425 aaKnown RBP14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 CYP4F8P98187 520 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ACSM2AQ08AH3 577 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 MPPE1Q53F39 396 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ACSM2BQ68CK6 577 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 ZNF517Q6ZMY9 492 aaPredicted RBP14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 PTCHD4Q6ZW05 846 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 SLC34A3Q8N130 599 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 SMURF1Q9HCE7 757 aa14.01□□□□□ -0.17
SEMA3F-202ENST00000413852 TMEM39AQ9NV64 488 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms