RNA–Protein interactions for RNA: ENST00000409987.5

LSM5-206, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 5 BASIC

Gene LSM5, Length 504 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-206ENST00000409987 MCMDC2Q4G0Z9 681 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 LACTB2Q53H82 288 aaPredicted RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 SPDYCQ5MJ68 293 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 SPATA46Q5T0L3 261 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 C11orf63Q6NUN7 778 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 ARHGAP11AQ6P4F7 1023 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 ZYG11AQ6WRX3 759 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 VASH2Q86V25 355 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 ANKRD46Q86W74 232 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 RASGEF1AQ8N9B8 481 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 THAP8Q8NA92 274 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 VANGL1Q8TAA9 524 aaPredicted RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 GRHL3Q8TE85 626 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 SELENOMQ8WWX9 145 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 SPAG8Q99932 426 aaPredicted RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 DDX50Q9BQ39 737 aaKnown RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 RTP3Q9BQQ7 232 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 TBCDQ9BTW9 1192 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 PUS3Q9BZE2 481 aaKnown RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 RAB33BQ9H082 229 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 UBQLN3Q9H347 655 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 SNX25Q9H3E2 840 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 GORASP2Q9H8Y8 452 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 GKN1Q9NS71 199 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 DAPK2Q9UIK4 370 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 CAB39Q9Y376 341 aaPredicted RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 TMED3Q9Y3Q3 217 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 TNFRSF18Q9Y5U5 241 aa4.71□□□□□ -1.66
LSM5-206ENST00000409987 DDX49Q9Y6V7 483 aaKnown RBP4.71□□□□□ -1.66
LSM5-206ENST00000409987 AQRO60306 1485 aaKnown RBP eCLIP4.7□□□□□ -1.668e-7■■■□□ 16.1
LSM5-206ENST00000409987 HEG1Q9ULI3 1381 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 IGKV2D-30A0A075B6S6 120 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 TRIM49BA6NDI0 452 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 C2orf81A6NN90 581 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 MMP10P09238 476 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 IL4RP24394 825 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 EPHA2P29317 976 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 PDX1P52945 283 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 DVL1P1P54792 670 aaPredicted RBP4.7□□□□□ -1.66
LSM5-206ENST00000409987 GSDMDP57764 484 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 GBE1Q04446 702 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 TMED1Q13445 227 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 SNX1Q13596 522 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 UGT3A2Q3SY77 523 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 BTNL8Q6UX41 500 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 ZNF771Q7L3S4 317 aaPredicted RBP4.7□□□□□ -1.66
LSM5-206ENST00000409987 ASPGQ86U10 573 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 MEX3DQ86XN8 651 aaKnown RBP4.7□□□□□ -1.66
LSM5-206ENST00000409987 TMEM126BQ8IUX1 230 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 PLD3Q8IV08 490 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 TMEM139Q8IV31 216 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 CDH26Q8IXH8 852 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 CIARTQ8N365 385 aaPredicted RBP4.7□□□□□ -1.66
LSM5-206ENST00000409987 ZCCHC7Q8N3Z6 543 aaKnown RBP4.7□□□□□ -1.66
LSM5-206ENST00000409987 RNF148Q8N7C7 305 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 OR11H4Q8NGC9 324 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 OR13A1Q8NGR1 328 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 OR1J1Q8NGS3 322 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 CD101Q93033 1021 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 FAM46BQ96A09 425 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 SLC47A1Q96FL8 570 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 SCRN2Q96FV2 425 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 THOC1Q96FV9 657 aaKnown RBP4.7□□□□□ -1.66
LSM5-206ENST00000409987 RASL10BQ96S79 203 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 ZNF416Q9BWM5 594 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 SLC2A11Q9BYW1 496 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 CUEDC2Q9H467 287 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 RMND5AQ9H871 391 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 Q9H8V8 135 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 ZBTB20Q9HC78 741 aaPredicted RBP4.7□□□□□ -1.66
LSM5-206ENST00000409987 TXNDC16Q9P2K2 825 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 SLC7A7Q9UM01 511 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 FAF1Q9UNN5 650 aaPredicted RBP4.7□□□□□ -1.66
LSM5-206ENST00000409987 KCNJ14Q9UNX9 436 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 WDR83OSQ9Y284 106 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 TMED5Q9Y3A6 229 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 JRKLQ9Y4A0 524 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 CLASP1Q7Z460 1538 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 NCAPD2Q15021 1401 aa4.7□□□□□ -1.66
LSM5-206ENST00000409987 SRCAPQ6ZRS2 3230 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 A0A087X0K7 114 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 CTAGE15A4D2H0 777 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 EME2A4GXA9 379 aaPredicted RBP4.69□□□□□ -1.66
LSM5-206ENST00000409987 ANKDD1BA6NHY2 528 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 ACOT8O14734 319 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 NUDT21O43809 227 aaKnown RBP4.69□□□□□ -1.66
LSM5-206ENST00000409987 PRKNO60260 465 aaPredicted RBP4.69□□□□□ -1.66
LSM5-206ENST00000409987 MTX2O75431 263 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 CETPP11597 493 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 MARK3P27448 753 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 AKT2P31751 481 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 CCKARP32238 428 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 MNDAP41218 407 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 TNNT2P45379 298 aaPredicted RBP4.69□□□□□ -1.66
LSM5-206ENST00000409987 MTIF2P46199 727 aaKnown RBP4.69□□□□□ -1.66
LSM5-206ENST00000409987 METAP1P53582 386 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 CLDN15P56746 228 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 SPIBQ01892 262 aa4.69□□□□□ -1.66
LSM5-206ENST00000409987 LCP2Q13094 533 aa4.69□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms