RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 PYDC1Q8WXC3 89 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 ROPN1LQ96C74 230 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 C7orf26Q96N11 449 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 EPB41L1Q9H4G0 881 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 KCNK12Q9HB15 430 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TIMMDC1Q9NPL8 285 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 C11orf16Q9NQ32 467 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TMEM9BQ9NQ34 198 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TAAR2Q9P1P5 351 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 MYOCOSA0A1B0GUC4 107 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 C2CD4DB7Z1M9 353 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 MT-ND5P03915 603 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 FESP07332 822 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 BPIP17213 487 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 HOXD13P35453 343 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 NOVP48745 357 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PMS2P3Q13401 168 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 DPYSQ14117 519 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 NRF1Q16656 503 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SYT16Q17RD7 645 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 CATSPEREQ5SY80 951 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TLDC1Q6P9B6 456 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 AAGABQ6PD74 315 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TSPAN33Q86UF1 283 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TRIM73Q86UV7 250 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 HPS6Q86YV9 775 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 FBXW8Q8N3Y1 598 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 NAT8LQ8N9F0 302 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 OR10A6Q8NH74 314 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 NANOS1Q8WY41 292 aaKnown RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TP53INP1Q96A56 240 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 COL21A1Q96P44 957 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PLGRKTQ9HBL7 147 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 HMG20AQ9NP66 347 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SSU72Q9NP77 194 aaKnown RBP4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SLC17A6Q9P2U8 582 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 PACSIN3Q9UKS6 424 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 SSR3Q9UNL2 185 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 TESMINQ9Y4I5 508 aa4.84□□□□□ -1.63
SCN3A-203ENST00000409101 LCHNA4D1U4 455 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 A8MT66 165 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 ADAM12O43184 909 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 PGCP20142 388 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 DNAJB1P25685 340 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 CD27P26842 260 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 SLC6A4P31645 630 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 IL12RB1P42701 662 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 PCYT1AP49585 367 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 RAB39AQ14964 217 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 KCTD19Q17RG1 926 aaPredicted RBP4.84□□□□□ -1.64
SCN3A-203ENST00000409101 OR4F3Q6IEY1 312 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 C1orf94Q6P1W5 598 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 GALNT5Q7Z7M9 940 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 NPAS3Q8IXF0 933 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 NLGN4XQ8N0W4 816 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 SCML4Q8N228 414 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 ZNF781Q8N8C0 355 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 NR4A3Q92570 626 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 DDIT4LQ96D03 193 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 SERINC2Q96SA4 455 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 CDX2Q99626 313 aaPredicted RBP4.84□□□□□ -1.64
SCN3A-203ENST00000409101 ARRDC1-AS1Q9H2J1 176 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 CENPMQ9NSP4 180 aa4.84□□□□□ -1.64
SCN3A-203ENST00000409101 CRNNQ9UBG3 495 aaPredicted RBP4.84□□□□□ -1.64
SCN3A-203ENST00000409101 NRAPQ86VF7 1730 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 H0YC42 278 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SOX1O00570 391 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 MED26O95402 600 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZBTB11O95625 1053 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 F7P08709 466 aaPredicted RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ENGP17813 658 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 IGFBP5P24593 272 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 KLF10Q13118 480 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TARDBPQ13148 414 aaKnown RBP eCLIP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 OLIG2Q13516 323 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RBM20Q5T481 1227 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CXorf57Q6NSI4 855 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TRMT10BQ6PF06 316 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SLC34A3Q8N130 599 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ZADH2Q8N4Q0 377 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GATSQ8NAP1 163 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SGCDQ92629 289 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GTPBP3Q969Y2 492 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TESCQ96BS2 214 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SCRN2Q96FV2 425 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RBP7Q96R05 134 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 SH3GL2Q99962 352 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ALG2Q9H553 416 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 RPF2Q9H7B2 306 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GPRC5BQ9NZH0 403 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 ATXN10Q9UBB4 475 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 CA5BQ9Y2D0 317 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 LOC100506127A0A0U1RQW1 187 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 TCRBV7S3A2A0A539 114 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 hCG_2039718K7EN88 272 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 LINC01565O15544 149 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 GATBO75879 557 aaKnown RBP4.83□□□□□ -1.64
SCN3A-203ENST00000409101 C6orf47O95873 294 aa4.83□□□□□ -1.64
SCN3A-203ENST00000409101 AHSGP02765 367 aa4.83□□□□□ -1.64
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms