RNA–Protein interactions for RNA: ENST00000397763.5

COL6A2-203, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,101 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-203ENST00000397763 RGS6P49758 472 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 PRKCZQ05513 592 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 TRIM71Q2Q1W2 868 aaKnown RBP13.24□□□□□ -0.29
COL6A2-203ENST00000397763 CST9Q5W186 159 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 FAHD1Q6P587 224 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 TMCO2Q7Z6W1 182 aaPredicted RBP13.24□□□□□ -0.29
COL6A2-203ENST00000397763 MMP21Q8N119 569 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 C2orf73Q8N5S3 287 aaPredicted RBP13.24□□□□□ -0.29
COL6A2-203ENST00000397763 IL17RDQ8NFM7 739 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 OR52E4Q8NGH9 312 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 UBASH3BQ8TF42 649 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 GABARAPL1Q9H0R8 117 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 IRF2BPLQ9H1B7 796 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 MMP28Q9H239 520 aa13.24□□□□□ -0.29
COL6A2-203ENST00000397763 APOL3O95236 402 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 CDK1P06493 297 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 HMGA1P17096 107 aaKnown RBP13.23□□□□□ -0.29
COL6A2-203ENST00000397763 GPX2P18283 190 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 SLC15A1P46059 708 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 RPS26P62854 115 aaKnown RBP13.23□□□□□ -0.29
COL6A2-203ENST00000397763 KIAA1841Q6NSI8 718 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 OTOP2Q7RTS6 562 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 WDR53Q7Z5U6 358 aaPredicted RBP13.23□□□□□ -0.29
COL6A2-203ENST00000397763 LACC1Q8IV20 430 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 BBS7Q8IWZ6 715 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 OR7G1Q8NGA0 311 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 OR4A15Q8NGL6 344 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 OR6F1Q8NGZ6 308 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 NFKBIDQ8NI38 313 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 TESCQ96BS2 214 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 YME1L1Q96TA2 773 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 OR2B2Q9GZK3 357 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 TIGARQ9NQ88 270 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 FBXL12Q9NXK8 326 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 KCTD5Q9NXV2 234 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 PRKAR2AP13861 404 aaKnown RBP13.23□□□□□ -0.29
COL6A2-203ENST00000397763 PRKCAP17252 672 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 PRPS1L1P21108 318 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 CD70P32970 193 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 CD83Q01151 205 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 LRRC74AQ0VAA2 488 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 DOC2AQ14183 400 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 CPTPQ5TA50 214 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 LYPD8Q6UX82 237 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 RFPL4BQ6ZWI9 263 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 WDR36Q8NI36 951 aaKnown RBP13.23□□□□□ -0.29
COL6A2-203ENST00000397763 UPF1Q92900 1129 aaKnown RBP eCLIP13.23□□□□□ -0.29
COL6A2-203ENST00000397763 TMEM203Q969S6 136 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 TP53INP1Q96A56 240 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 TRNT1Q96Q11 434 aaKnown RBP13.23□□□□□ -0.29
COL6A2-203ENST00000397763 SYT17Q9BSW7 474 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 HTATIP2Q9BUP3 242 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 SLC29A3Q9BZD2 475 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 ZDHHC6Q9H6R6 413 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 DNAJC11Q9NVH1 559 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 VPS29Q9UBQ0 182 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 CLEC2DQ9UHP7 191 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 PCDHB7Q9Y5E2 793 aa13.23□□□□□ -0.29
COL6A2-203ENST00000397763 FAM172BPA6NC97 362 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 EOMESO95936 686 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 IFI30P13284 250 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PSMA3P25788 255 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 GGT2P36268 569 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 E2F2Q14209 437 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 RGNQ15493 299 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 LRRC26Q2I0M4 334 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 ZNF385BQ569K4 471 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 C10orf62Q5T681 223 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PNCKQ6P2M8 343 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 MACC1Q6ZN28 852 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 TRIM48Q8IWZ4 208 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 CELF5Q8N6W0 485 aaKnown RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 IPCEF1Q8WWN9 437 aaPredicted RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 FYTTD1Q96QD9 318 aaKnown RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SIGLEC11Q96RL6 698 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 TAS2R9Q9NYW1 312 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 MUTYHQ9UIF7 546 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 TMPRSS11EQ9UL52 423 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 RAB23Q9ULC3 237 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PCDHGB3Q9Y5G1 929 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PLXNA3P51805 1871 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SEPT4O43236 478 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 CSF2P04141 144 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SEMG1P04279 462 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 RPS3P23396 243 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 NSG1P42857 185 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 BDKRB1P46663 353 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SLAMF1Q13291 335 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 ZNF544Q6NX49 715 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PAQR6Q6TCH4 344 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 MEX3DQ86XN8 651 aaKnown RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 MYDGFQ969H8 173 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 PKP4Q99569 1192 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 XRN2Q9H0D6 950 aaKnown RBP eCLIP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SGK2Q9HBY8 427 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 SNTG1Q9NSN8 517 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 GPATCH2Q9NW75 528 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 KLHL20Q9Y2M5 609 aa13.22□□□□□ -0.29
COL6A2-203ENST00000397763 CFAP20Q9Y6A4 193 aaKnown RBP13.22□□□□□ -0.29
COL6A2-203ENST00000397763 MGAT4DA6NG13 374 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms