RNA–Protein interactions for RNA: ENST00000397043.7

ATP2A3-206, Transcript of ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene ATP2A3, Length 3,197 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATP2A3-206ENST00000397043 CSNK1DP48730 415 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 CRYBA2P53672 197 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 CRISP3P54108 245 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 CXCR4P61073 352 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ST3GAL4Q11206 333 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ZNF404Q494X3 552 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 PLEKHG7Q6ZR37 379 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 METTL3Q86U44 580 aaKnown RBP15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 CACTIN-AS1Q8N1I8 211 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 SYNPOQ8N3V7 929 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 MFSD4AQ8N468 514 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 RASGEF1AQ8N9B8 481 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 OR2A12Q8NGT7 310 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 PPCDCQ96CD2 204 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 IL4I1Q96RQ9 567 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 SLIRPQ9GZT3 109 aaKnown RBP15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 GIN1Q9NXP7 522 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 PRKAB1Q9Y478 270 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 LYVE1Q9Y5Y7 322 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 PITPNM1O00562 1244 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ATG13O75143 517 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 CNOT3O75175 753 aaKnown RBP15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ELFN1P0C7U0 828 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 TYRP14679 529 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 IDSP22304 550 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 IMPA1P29218 277 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ASMTP46597 345 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 TAS2R50P59544 299 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 DEFB103AP81534 67 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 SP140Q13342 867 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 GRIN2CQ14957 1233 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 CDKL4Q5MAI5 379 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 MED27Q6P2C8 311 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 NCCRP1Q6ZVX7 275 aaPredicted RBP15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 MMP21Q8N119 569 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 CRIPAKQ8N1N5 446 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ZNF675Q8TD23 568 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 PHF10Q8WUB8 498 aaKnown RBP15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 IPCEF1Q8WWN9 437 aaPredicted RBP15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ATL1Q8WXF7 558 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 MYDGFQ969H8 173 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 HEPHQ9BQS7 1158 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 GABARAPL1Q9H0R8 117 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 MIEF1Q9NQG6 463 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 HSPE1-MOB4S4R3N1 261 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ADAMDEC1O15204 470 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 HNF4AP41235 474 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 SELENOWP63302 87 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 TMEM115Q12893 351 aaPredicted RBP15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 IFI44LQ53G44 452 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ANXA8L1Q5VT79 327 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 FAM124AQ86V42 546 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 SLC39A11Q8N1S5 342 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ZNF740Q8NDX6 193 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 ECHDC3Q96DC8 303 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 TCEAL4Q96EI5 215 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 VMP1Q96GC9 406 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 MCCC1Q96RQ3 725 aaPredicted RBP15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 MS4A12Q9NXJ0 267 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 HS3ST2Q9Y278 367 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 TSC22D4Q9Y3Q8 395 aa15.28■□□□□ 0.04
ATP2A3-206ENST00000397043 PCDH17O14917 1159 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 RGS5O15539 181 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 GSTM1P09488 218 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 CYP2A6P11509 494 aaPredicted RBP15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 HOXB6P17509 224 aaKnown RBP15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 TBPL1P62380 186 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 RAE1P78406 368 aaKnown RBP15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 VEZF1Q14119 521 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 ARMCX4Q5H9R4 360 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 GCNT6Q5T4J0 391 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 RNF165Q6ZSG1 346 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 COMMD6Q7Z4G1 85 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 C11orf74Q86VG3 221 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 WDR48Q8TAF3 677 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 GGHQ92820 318 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 YME1L1Q96TA2 773 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 SPATA6Q9NWH7 488 aaPredicted RBP15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 PLAGL1Q9UM63 463 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 CCDC88CQ9P219 2028 aa15.27■□□□□ 0.04
ATP2A3-206ENST00000397043 IGLV3-16A0A075B6K0 115 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 CD40LGP29965 261 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 TIA1P31483 386 aaKnown RBP eCLIP15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 FEN1P39748 380 aaKnown RBP15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 PTPN5P54829 565 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 LY6G5CQ5SRR4 150 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 TNFAIP8L2Q6P589 184 aaPredicted RBP15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 CACUL1Q86Y37 369 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 FBLIM1Q8WUP2 373 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 HRASLS5Q96KN8 279 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 VPS35Q96QK1 796 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 KCNS3Q9BQ31 491 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 CCM2Q9BSQ5 444 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 ASAH2Q9NR71 780 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 ERVW-1Q9UQF0 538 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 SH2B3Q9UQQ2 575 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 DYRK1BQ9Y463 629 aa15.27■□□□□ 0.03
ATP2A3-206ENST00000397043 PRMT3O60678 531 aa15.26■□□□□ 0.03
ATP2A3-206ENST00000397043 RFPL2O75678 378 aa15.26■□□□□ 0.03
ATP2A3-206ENST00000397043 SOX14O95416 240 aa15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms