RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 HPSE2Q8WWQ2 592 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 SEPT8Q92599 483 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 TMEM143Q96AN5 459 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 NXPE2Q96DL1 559 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 HIPK2Q9H2X6 1198 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 IL36AQ9UHA7 158 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 SLC12A6Q9UHW9 1150 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 MAN1B1Q9UKM7 699 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 NUDCQ9Y266 331 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 ATP6V0A2Q9Y487 856 aa4.47□□□□□ -1.69
HMGB1P10-201ENST00000395823 CCDC162PA2VCL2 907 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 CFAP73A6NFT4 308 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 KPNA7A9QM74 516 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 MT-ATP6P00846 226 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 MT-ND2P03891 347 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 PITPNBP48739 271 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 ZNF131P52739 623 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 LBX1P52954 281 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 HSD17B7P56937 341 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 HUNKP57058 714 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 TRIM29Q14134 588 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 ZNF585BQ52M93 769 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 TAF1BQ53T94 588 aaPredicted RBP4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 C12orf60Q5U649 245 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 OR6B2Q6IFH4 312 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 SPSB3Q6PJ21 355 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 CD164L2Q6UWJ8 174 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 LEKR1Q6ZMV7 388 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 SLC24A5Q71RS6 500 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 TMEM99Q8N816 258 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 OR2T11Q8NH01 316 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 CHURC1Q8WUH1 139 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 APOBEC4Q8WW27 367 aaKnown RBP4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 ANP32BQ92688 251 aaKnown RBP4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 C10orf90Q96M02 699 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 MEIS3Q99687 375 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 ATP13A3Q9H7F0 1226 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 RPF1Q9H9Y2 349 aaKnown RBP4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 STAU2Q9NUL3 570 aaKnown RBP eCLIP4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 PANK4Q9NVE7 773 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 TBC1D13Q9NVG8 400 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 TMOD3Q9NYL9 352 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 KCNN3Q9UGI6 736 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 FBXL4Q9UKA2 621 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 CCPG1Q9ULG6 757 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 GRID1Q9ULK0 1009 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 NCKAP1Q9Y2A7 1128 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 COLEC10Q9Y6Z7 277 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 SYNRGQ9UMZ2 1314 aa4.46□□□□□ -1.7
HMGB1P10-201ENST00000395823 TRBV4-1A0A0J9YWV2 114 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 K7EPI3 171 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 CIDEAO60543 219 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 GRAP2O75791 330 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 KRT33AO76009 404 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 GHRP10912 638 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 FGF3P11487 239 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 DESP17661 470 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 AMD1P17707 334 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 ITGB6P18564 788 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 HERV-K104P61576 105 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 MYL7Q01449 175 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 CDR2Q01850 454 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 SP3Q02447 781 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 GPR50Q13585 617 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 STX1AQ16623 288 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 LCN1P1Q5VSP4 162 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 C17orf107Q6ZR85 190 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 TRPT1Q86TN4 253 aaKnown RBP4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 NLRP14Q86W24 1093 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 SAMD14Q8IZD0 417 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 GPC2Q8N158 579 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 RFLNBQ8N5W9 214 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 ARL6IP6Q8N6S5 226 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 ZBTB44Q8NCP5 570 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 TRPV3Q8NET8 790 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 SPATA18Q8TC71 538 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 ULK4Q96C45 1275 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 C16orf58Q96GQ5 468 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 LPAR4Q99677 370 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 NUSAP1Q9BXS6 441 aaKnown RBP4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 NACAP1Q9BZK3 213 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 SIRPDQ9H106 197 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 ABCG4Q9H172 646 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 DPEP2Q9H4A9 486 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 INTS10Q9NVR2 710 aaKnown RBP4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 SOHLH2Q9NX45 425 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 NDUFA13Q9P0J0 144 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 C19orf25Q9UFG5 118 aaPredicted RBP4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 PRDM4Q9UKN5 801 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 TMCC3Q9ULS5 477 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 PLEKHA6Q9Y2H5 1048 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 KIAA1210Q9ULL0 1709 aa4.45□□□□□ -1.7
HMGB1P10-201ENST00000395823 PCSK5Q92824 1860 aa4.44□□□□□ -1.7
HMGB1P10-201ENST00000395823 A0A087WUV0 522 aaPredicted RBP4.44□□□□□ -1.7
HMGB1P10-201ENST00000395823 GLTPD2A6NH11 291 aa4.44□□□□□ -1.7
HMGB1P10-201ENST00000395823 MSGN1A6NI15 193 aa4.44□□□□□ -1.7
HMGB1P10-201ENST00000395823 TEX28O15482 410 aa4.44□□□□□ -1.7
HMGB1P10-201ENST00000395823 INSIG1O15503 277 aa4.44□□□□□ -1.7
HMGB1P10-201ENST00000395823 BUB3O43684 328 aa4.44□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms