RNA–Protein interactions for RNA: ENST00000394258.6

RCCD1-201, Transcript of RCC1 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RCCD1, Length 2,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RCCD1-201ENST00000394258 NIPAL1Q6NVV3 410 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 ERICH5Q6P6B1 374 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 SYNPOQ8N3V7 929 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 TMCO5AQ8N6Q1 288 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 ZNF540Q8NDQ6 660 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 ZNF740Q8NDX6 193 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 TRUB1Q8WWH5 349 aaKnown RBP18.81■□□□□ 0.6
RCCD1-201ENST00000394258 NXPE3Q969Y0 559 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 CIDECQ96AQ7 238 aaPredicted RBP18.81■□□□□ 0.6
RCCD1-201ENST00000394258 KRT84Q9NSB2 600 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 DAPK2Q9UIK4 370 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 ACSL6Q9UKU0 697 aa18.81■□□□□ 0.6
RCCD1-201ENST00000394258 QSOX1O00391 747 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 EFCAB14O75071 495 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 FPR1P21462 350 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 PSMB9P28065 219 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 VIPR2P41587 438 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 ST8SIA6P61647 398 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 SLC35A2P78381 396 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 CAPN13Q6MZZ7 669 aaPredicted RBP18.8■□□□□ 0.6
RCCD1-201ENST00000394258 KIAA0907Q7Z7F0 614 aaPredicted RBP18.8■□□□□ 0.6
RCCD1-201ENST00000394258 SLCO6A1Q86UG4 719 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 SFTPA1Q8IWL2 248 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 RORBQ92753 470 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 VPS35Q96QK1 796 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 ACAT2Q9BWD1 397 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 GABARAPL1Q9H0R8 117 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 SPNS1Q9H2V7 528 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 BRF2Q9HAW0 419 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 TMEM184CQ9NVA4 438 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 ERGIC3Q9Y282 383 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 PTPRSQ13332 1948 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 TSPAN11A1L157 253 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 CARNS1A5YM72 827 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 ANTXRLA6NF34 631 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 MMP20O60882 483 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 ETFAP13804 333 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 DDX6P26196 483 aaKnown RBP eCLIP18.8■□□□□ 0.66e-8■□□□□ 9.2
RCCD1-201ENST00000394258 TIA1P31483 386 aaKnown RBP eCLIP18.8■□□□□ 0.6
RCCD1-201ENST00000394258 RCVRNP35243 200 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 HBA1P69905 142 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 IL18R1Q13478 541 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 TMEM236Q5W0B7 351 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 ARMCX6Q7L4S7 300 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 GPR155Q7Z3F1 870 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 OR5AK3PQ8NH89 298 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 WDR48Q8TAF3 677 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 SPPL2AQ8TCT8 520 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 ZFP90Q8TF47 636 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 SH3YL1Q96HL8 342 aaPredicted RBP18.8■□□□□ 0.6
RCCD1-201ENST00000394258 IL17FQ96PD4 163 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 PLAGL1Q9UM63 463 aa18.8■□□□□ 0.6
RCCD1-201ENST00000394258 C1orf226A1L170 272 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 SUV39H1O43463 412 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 SOD1P00441 154 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 CYP17A1P05093 508 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 HPCAL1P37235 193 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 ASMTP46597 345 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 OR1E2P47887 323 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 RPL3LQ92901 407 aaKnown RBP18.79■□□□□ 0.6
RCCD1-201ENST00000394258 ZNF566Q969W8 418 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 DUSP21Q9H596 190 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 SPATA7Q9P0W8 599 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 PRRT4C9JH25 899 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 FAM20BO75063 409 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 C6orf47O95873 294 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 KRT20P35900 424 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 GPR1P46091 355 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 SLC6A11P48066 632 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 NCS1P62166 190 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 IQCCQ4KMZ1 466 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 COMMD6Q7Z4G1 85 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 ZNF557Q8N988 423 aaPredicted RBP18.79■□□□□ 0.6
RCCD1-201ENST00000394258 OR52J3Q8NH60 311 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 HPS1Q92902 700 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 DTD2Q96FN9 168 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 RAD18Q9NS91 495 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 SPASTQ9UBP0 616 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 TESMINQ9Y4I5 508 aa18.79■□□□□ 0.6
RCCD1-201ENST00000394258 M0QX08 132 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 ZNF197O14709 1029 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 SPINT1O43278 529 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 VIPP01282 170 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 ZNF8P17098 575 aaPredicted RBP18.78■□□□□ 0.6
RCCD1-201ENST00000394258 RRM2P31350 389 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 RPP38P78345 283 aaKnown RBP18.78■□□□□ 0.6
RCCD1-201ENST00000394258 NFE2L1Q14494 772 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 MAD2L1BPQ15013 274 aaPredicted RBP18.78■□□□□ 0.6
RCCD1-201ENST00000394258 CARTPTQ16568 116 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 SPIN4Q56A73 249 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 SETD9Q8NE22 299 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 SORBS1Q9BX66 1292 aaKnown RBP18.78■□□□□ 0.6
RCCD1-201ENST00000394258 GPATCH2Q9NW75 528 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 DKK3Q9UBP4 350 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 NDRG4Q9ULP0 352 aaKnown RBP18.78■□□□□ 0.6
RCCD1-201ENST00000394258 INSL6Q9Y581 213 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 CHD9Q3L8U1 2897 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 TMEM229AB2RXF0 380 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 PCDHGA12O60330 932 aa18.78■□□□□ 0.6
RCCD1-201ENST00000394258 GCM2O75603 506 aaPredicted RBP18.78■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms