RNA–Protein interactions for RNA: ENST00000373888.8

SMPDL3B-201, Transcript of sphingomyelin phosphodiesterase acid like 3B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMPDL3B, Length 1,548 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPDL3B-201ENST00000373888 METTL2AQ96IZ6 378 aaKnown RBP13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 PPP3R2Q96LZ3 170 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 NMRK1Q9NWW6 199 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 VPS29Q9UBQ0 182 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 PLCL2Q9UPR0 1127 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 GVINP1Q7Z2Y8 2422 aa13.97□□□□□ -0.17
SMPDL3B-201ENST00000373888 COL27A1Q8IZC6 1860 aaPredicted RBP13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 A8MU76 341 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 NDUFS4O43181 175 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 HCRTR1O43613 425 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 GFRA3O60609 400 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 SRPX2O60687 465 aaPredicted RBP13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 SEMA3DO95025 777 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 TGFB1P01137 390 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 SLC35G6P0C7Q6 338 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 CDK4P11802 303 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 CSRP1P21291 193 aaKnown RBP13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 ARL4DP49703 201 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 PDX1P52945 283 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 HYAL2Q12891 473 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 SMU1Q2TAY7 513 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 DEFB110Q30KQ9 67 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 ATP6AP1LQ52LC2 224 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 C6orf136Q5SQH8 315 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 MANEAQ5SRI9 462 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 DEPDC1Q5TB30 811 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 KHDRBS2Q5VWX1 349 aaKnown RBP13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 OGFOD2Q6N063 350 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 RBM44Q6ZP01 1051 aaKnown RBP13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 TREML1Q86YW5 311 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 ZNF655Q8N720 491 aaPredicted RBP13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 CAMKVQ8NCB2 501 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 DEFB124Q8NES8 71 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 MCUR1Q96AQ8 359 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 ZNF285Q96NJ3 590 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 SLC6A16Q9GZN6 736 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 OR51B5Q9H339 312 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 LRTM1Q9HBL6 345 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 ENAMQ9NRM1 1142 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 C1orf109Q9NX04 203 aa13.96□□□□□ -0.17
SMPDL3B-201ENST00000373888 LRIT2A6NDA9 550 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 TM4SF5O14894 197 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 P2RX6O15547 441 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 PEX11AO75192 247 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 DKK1O94907 266 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 SERPIND1P05546 499 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 LBPP18428 481 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 NCF2P19878 526 aaPredicted RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 HNRNPH1P31943 449 aaKnown RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 GTF2A1P52655 376 aaPredicted RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 IRX1P78414 480 aaPredicted RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 RGS1Q08116 209 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 TBL3Q12788 808 aaKnown RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 KIAA0040Q15053 153 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 AP5B1Q2VPB7 878 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 TMEM35AQ53FP2 167 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 TMTC4Q5T4D3 741 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 NXNQ6DKJ4 435 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 CHSY3Q70JA7 882 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 ZFAND4Q86XD8 727 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 KIAA2013Q8IYS2 634 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 CPSF7Q8N684 471 aaKnown RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 ITFG2Q969R8 447 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 C11orf24Q96F05 449 aaPredicted RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 AICDAQ9GZX7 198 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 PRM3Q9NNZ6 103 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 TAS2R1Q9NYW7 299 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 GIMAP2Q9UG22 337 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 MDC1Q14676 2089 aaKnown RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 B2RBV5 119 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 TXNDC9O14530 226 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 GSC2O15499 205 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 ZSCAN9O15535 394 aaPredicted RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 SH3BGRLO75368 114 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 ATP6V1G2O95670 118 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 CCKBRP32239 447 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 ARFIP1P53367 373 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 VSX2P58304 361 aaPredicted RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 STXBP1P61764 594 aaKnown RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 ERVK-8P63133 956 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 INSM1Q01101 510 aaPredicted RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 UBAP2LQ14157 1087 aaKnown RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 KCNAB1Q14722 419 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 SPIN4Q56A73 249 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 TCTE1Q5JU00 501 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 WASHC2DQ5SRD0 308 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 PHF19Q5T6S3 580 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 CDCP2Q5VXM1 449 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 B3GNT8Q7Z7M8 397 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 PACS2Q86VP3 889 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 CSNK1A1LQ8N752 337 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 RCBTB1Q8NDN9 531 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 CHTF18Q8WVB6 975 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 MS4A6EQ96DS6 147 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 APIPQ96GX9 242 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 TMEM74Q96NL1 305 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 MACROD1Q9BQ69 325 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 CENPKQ9BS16 269 aa13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 MRPL1Q9BYD6 325 aaKnown RBP13.95□□□□□ -0.18
SMPDL3B-201ENST00000373888 REXO4Q9GZR2 422 aaKnown RBP13.95□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms