RNA–Protein interactions for RNA: ENST00000369846.8

LCA5-201, Transcript of LCA5, lebercilin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LCA5, Length 4,542 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LCA5-201ENST00000369846 ICAM1P05362 532 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RPS17P08708 135 aaKnown RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 PCLAFQ15004 111 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 PEA15Q15121 130 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ZNF367Q7RTV3 350 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ZNF101Q8IZC7 436 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RBFAQ8N0V3 343 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 CADM3Q8N126 398 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ZFP82Q8N141 532 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 SLC35B2Q8TB61 432 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 MOCOSQ96EN8 888 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 SPACA7Q96KW9 195 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 NECAB3Q96P71 396 aaPredicted RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 MTERF1Q99551 399 aaKnown RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 OR51J1Q9H342 316 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 DZANK1Q9NVP4 752 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 PARPBPQ9NWS1 579 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 NOX1Q9Y5S8 564 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 CDH10Q9Y6N8 788 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 SPEF2Q9C093 1822 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 A0A1B0GVI7 797 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 H1F0P07305 194 aaKnown RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 ZDHHC11BP0C7U3 371 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RAB3AP20336 220 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 CCND3P30281 292 aaPredicted RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 SOX2P48431 317 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 CAMLGP49069 296 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RPIAP49247 311 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 RAB5CP51148 216 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 PRR5P85299 388 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 GALK2Q01415 458 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 PDSS1Q5T2R2 415 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 OR4F3Q6IEY1 312 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 NANOGP8Q6NSW7 305 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ZNF705AQ6ZN79 300 aaPredicted RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 C2orf73Q8N5S3 287 aaPredicted RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 FAM83FQ8NEG4 500 aaPredicted RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 FAM46DQ8NEK8 389 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 C2CD4CQ8TF44 421 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 NANOGQ9H9S0 305 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 ZBTB20Q9HC78 741 aaPredicted RBP8.31□□□□□ -1.08
LCA5-201ENST00000369846 OR6C2Q9NZP2 312 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 SCML2Q9UQR0 700 aa8.31□□□□□ -1.08
LCA5-201ENST00000369846 SULT1C2O00338 296 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 VILLO15195 856 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 GCATO75600 419 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 NDST3O95803 873 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 IGSF6O95976 241 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SYN1P17600 705 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 PKLRP30613 574 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 EPHX2P34913 555 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 ADRA1BP35368 520 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 TNFSF9P41273 254 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SMSP52788 366 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 DIO3P55073 304 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 JAM2P57087 298 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 TGFB2P61812 414 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 FPGSQ05932 587 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 COTL1Q14019 142 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 MAD2L1BPQ15013 274 aaPredicted RBP8.3□□□□□ -1.08
LCA5-201ENST00000369846 GPR19Q15760 415 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SPANXN4Q5MJ08 99 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 GPR157Q5UAW9 335 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 TCEAL6Q6IPX3 200 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 TPGS1Q6ZTW0 290 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 ZNF565Q8N9K5 539 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 TSPEARQ8WU66 669 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SLC6A7Q99884 636 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 PBDC1Q9BVG4 233 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SORBS1Q9BX66 1292 aaKnown RBP8.3□□□□□ -1.08
LCA5-201ENST00000369846 TSSK6Q9BXA6 273 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 IFT22Q9H7X7 185 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 ERVMER34-1Q9H9K5 563 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 MARCH2Q9P0N8 246 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 FZD4Q9ULV1 537 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 ZNF780BQ9Y6R6 833 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 GLI3P10071 1580 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 CTDSP2O14595 271 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 TLL1O43897 1013 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 OR8U9P0C7N5 309 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SERPINA4P29622 427 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 RPL9P32969 192 aaKnown RBP8.3□□□□□ -1.08
LCA5-201ENST00000369846 HTR7P34969 479 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 PPM1AP35813 382 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 PPP4CP60510 307 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 FOXM1Q08050 763 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SCARB2Q14108 478 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SPCS2Q15005 226 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 FOXR2Q6PJQ5 311 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 CORO6Q6QEF8 472 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 MRPL41Q8IXM3 137 aaKnown RBP8.3□□□□□ -1.08
LCA5-201ENST00000369846 ATP6V1C2Q8NEY4 427 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 PUM2Q8TB72 1066 aaKnown RBP eCLIP8.3□□□□□ -1.08
LCA5-201ENST00000369846 SHKBP1Q8TBC3 707 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 NSMAFQ92636 917 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SLCO2A1Q92959 643 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 MIOSQ9NXC5 875 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 SPATA31A6Q5VVP1 1343 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 NRP1O14786 923 aa8.3□□□□□ -1.08
LCA5-201ENST00000369846 RPP40O75818 363 aaKnown RBP8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms