RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 MBOAT1Q6ZNC8 495 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 NPWQ8N729 165 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 SUSD6Q92537 303 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 TTLL2Q9BWV7 592 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 KDELR3O43731 214 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 USP2O75604 605 aaPredicted RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 SLC25A12O75746 678 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 OR1D2P34982 312 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 SERINC3Q13530 473 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 HMBOX1Q6NT76 420 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 PCTPQ9UKL6 214 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 FBXW2Q9UKT8 454 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 SCML2Q9UQR0 700 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 LRRN3E7EW58 273 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 EDIL3O43854 480 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 SHMT2P34897 504 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 FOXA1P55317 472 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 SPHARQ15513 63 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 SETD6Q8TBK2 473 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 C1QTNF7Q9BXJ2 289 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 LRRN3Q9H3W5 708 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 CRTAC1Q9NQ79 661 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 PCDHGB7Q9Y5F8 929 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 C11orf97A0A1B0GVM6 126 aaPredicted RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 EEF1E1O43324 174 aaKnown RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 RETP07949 1114 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 ZNF3P17036 446 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 F8A1P23610 371 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 CSKP41240 450 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 ARCN1P48444 511 aaKnown RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 VARS2Q5ST30 1063 aaKnown RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 GTF2IRD2BQ6EKJ0 949 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 NOXRED1Q6NXP6 359 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 C14orf80Q86SX3 495 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 GTF2IRD2Q86UP8 949 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 RNASE11Q8TAA1 199 aaKnown RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 BRINP2Q9C0B6 783 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 PDLIM7Q9NR12 457 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 IL37Q9NZH6 218 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 SRRDQ9UH36 339 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 SLC9A3R1O14745 358 aaPredicted RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 BEST1O76090 585 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 POP4O95707 220 aaKnown RBP13.49□□□□□ -0.25
SMC5-201ENST00000361138 RB1P06400 928 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 CASP3P42574 277 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 TMEM17Q86X19 198 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 STX12Q86Y82 276 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 CHCHD4Q8N4Q1 142 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 PARP16Q8N5Y8 322 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 GDPD1Q8N9F7 314 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 TMIEQ8NEW7 156 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 OR13F1Q8NGS4 319 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 NEIL3Q8TAT5 605 aa13.49□□□□□ -0.25
SMC5-201ENST00000361138 FUBP3Q96I24 572 aaKnown RBP eCLIP13.49□□□□□ -0.25
SMC5-201ENST00000361138 SH3D21A4FU49 640 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 GTPBP1O00178 669 aaKnown RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 CAPN5O15484 640 aaPredicted RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 ITGA10O75578 1167 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 IL4RP24394 825 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 CRISP1P54107 249 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 ARF5P84085 180 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 SP140Q13342 867 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 IQCHQ86VS3 1027 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 CADM2Q8N3J6 435 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 SPERTQ8NA61 448 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 C1orf216Q8TAB5 229 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 GNPDA2Q8TDQ7 276 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 C15orf40Q8WUR7 153 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 UPF1Q92900 1129 aaKnown RBP eCLIP13.48□□□□□ -0.25
SMC5-201ENST00000361138 C1orf74Q96LT6 269 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 RNF121Q9H920 327 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 FOLH1BQ9HBA9 442 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 ASAH2Q9NR71 780 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 SLC35F4A4IF30 521 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 HMX3A6NHT5 357 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 EPOP01588 193 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 FUCA1P04066 466 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 EDNRAP25101 427 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 PTCHD3Q3KNS1 767 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 ATAD3CQ5T2N8 411 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 PTERQ96BW5 349 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 TRIB3Q96RU7 358 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 DPH2Q9BQC3 489 aaPredicted RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 RC3H2Q9HBD1 1191 aaKnown RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 PLCH1Q4KWH8 1693 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 C1QTNF3-AMACRE9PGA6 284 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 ACOT8O14734 319 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 CH25HO95992 272 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 HTR1BP28222 390 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 RPS24P62847 133 aaKnown RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 EFR3AQ14156 821 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 BTG3Q14201 252 aaPredicted RBP13.48□□□□□ -0.25
SMC5-201ENST00000361138 HS3ST5Q8IZT8 346 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 ATP6V1C2Q8NEY4 427 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 SLC22A17Q8WUG5 538 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 RNF31Q96EP0 1072 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 BEX1Q9HBH7 125 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 CD93Q9NPY3 652 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 TJP1Q07157 1748 aa13.48□□□□□ -0.25
SMC5-201ENST00000361138 SEMG2Q02383 582 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms