RNA–Protein interactions for RNA: ENST00000338468.7

PRKN-201, Transcript of parkin RBR E3 ubiquitin protein ligase, humanhuman

TSL 1 (best) BASIC

Gene PRKN, Length 1,276 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKN-201ENST00000338468 CD244Q9BZW8 370 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 EPB41L4BQ9H329 900 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 EHD1Q9H4M9 534 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 ZNF552Q9H707 407 aaPredicted RBP14.43□□□□□ -0.1
PRKN-201ENST00000338468 CNOT10Q9H9A5 744 aaKnown RBP14.43□□□□□ -0.1
PRKN-201ENST00000338468 ANKHQ9HCJ1 492 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 ATP13A2Q9NQ11 1180 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 GPR83Q9NYM4 423 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 PCDHGB7Q9Y5F8 929 aa14.43□□□□□ -0.1
PRKN-201ENST00000338468 DOCK10Q96BY6 2186 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 A0A087WUV0 522 aaPredicted RBP14.42□□□□□ -0.1
PRKN-201ENST00000338468 LOC102723996A0A087X1L8 192 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 OR2W5A6NFC9 320 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 SUPT3HB4E1H0 165 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 POC1B-GALNT4F8VUJ3 575 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 MAP2K7O14733 419 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 SUPT3HO75486 399 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 KLHL2O95198 593 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 INHBAP08476 426 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 ABHD2P08910 425 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 ZNF888P0CJ79 500 aaPredicted RBP14.42□□□□□ -0.1
PRKN-201ENST00000338468 MYBL2P10244 700 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 COX6A1P12074 109 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 ACPPP15309 386 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 ALOX12P18054 663 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 TYK2P29597 1187 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 XCR1P46094 333 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 GLRBP48167 497 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 CD97P48960 835 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 RGS1Q08116 209 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 AIMP2Q13155 320 aaKnown RBP14.42□□□□□ -0.1
PRKN-201ENST00000338468 E2F2Q14209 437 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 HERC3Q15034 1050 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 FAM83EQ2M2I3 478 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 NADK2Q4G0N4 442 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 DEFB134Q4QY38 66 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 FAAH2Q6GMR7 532 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 ADNP2Q6IQ32 1131 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 GSPT2Q8IYD1 628 aaKnown RBP14.42□□□□□ -0.1
PRKN-201ENST00000338468 TBC1D19Q8N5T2 526 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 RBMXL3Q8N7X1 1067 aaKnown RBP14.42□□□□□ -0.1
PRKN-201ENST00000338468 SNX31Q8N9S9 440 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 CAPS2Q9BXY5 557 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 VN1R1Q9GZP7 353 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 NT5DC2Q9H857 520 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 ZBTB20Q9HC78 741 aaPredicted RBP14.42□□□□□ -0.1
PRKN-201ENST00000338468 ZNF358Q9NW07 568 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 ZNF180Q9UJW8 692 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 MKL2Q9ULH7 1088 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 ZNF490Q9ULM2 529 aaPredicted RBP14.42□□□□□ -0.1
PRKN-201ENST00000338468 ZNF451Q9Y4E5 1061 aa14.42□□□□□ -0.1
PRKN-201ENST00000338468 RIPK2O43353 540 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 KLK8O60259 260 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 CCNT2O60583 730 aaKnown RBP14.41□□□□□ -0.1
PRKN-201ENST00000338468 H2AFYO75367 372 aaKnown RBP14.41□□□□□ -0.1
PRKN-201ENST00000338468 HPP00738 406 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 HEXBP07686 556 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 SERPINA6P08185 405 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 HNF4AP41235 474 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 MSH2P43246 934 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 SERPINB9P50453 376 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 RAB8AP61006 207 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 DOC2AQ14183 400 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 ACAP2Q15057 778 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 PDK4Q16654 411 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 TECRLQ5HYJ1 363 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 VWA5B1Q5TIE3 1220 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 TMIGD1Q6UXZ0 262 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 TRMT10CQ7L0Y3 403 aaKnown RBP14.41□□□□□ -0.1
PRKN-201ENST00000338468 LRRC70Q7Z2Q7 622 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 PARP9Q8IXQ6 854 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 TEX19Q8NA77 164 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 TRPV3Q8NET8 790 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 MIB2Q96AX9 1013 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 VPS11Q9H270 941 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 ZNF160Q9HCG1 818 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 LANCL2Q9NS86 450 aa14.41□□□□□ -0.1
PRKN-201ENST00000338468 NBPF19A0A087WUL8 3843 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 IGHV1-45A0A0A0MS14 117 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 CCDC189A1A4V9 331 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 LRRC14BA6NHZ5 514 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 TRIM49D1C9J1S8 452 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 K7EPI3 171 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 CLGNO14967 610 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 CHST10O43529 356 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 WFS1O76024 890 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 S100BP04271 92 aaPredicted RBP14.4□□□□□ -0.1
PRKN-201ENST00000338468 CXCR2P25025 360 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 ITGA3P26006 1051 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 HNRNPH1P31943 449 aaKnown RBP14.4□□□□□ -0.1
PRKN-201ENST00000338468 CASP2P42575 452 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 OLR1P78380 273 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 EEF1A2Q05639 463 aaKnown RBP14.4□□□□□ -0.1
PRKN-201ENST00000338468 PCDH1Q08174 1060 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 SETDB1Q15047 1291 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 PCOLCEQ15113 449 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 TBCCQ15814 346 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 XKR6Q5GH73 641 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 TOR1AIP1Q5JTV8 583 aa14.4□□□□□ -0.1
PRKN-201ENST00000338468 LANCL3Q6ZV70 420 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms