RNA–Protein interactions for RNA: ENST00000315713.5

ABCD3-201, Transcript of ATP binding cassette subfamily D member 3, humanhuman

TSL 1 (best) BASIC

Gene ABCD3, Length 884 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD3-201ENST00000315713 ZDHHC19Q8WVZ1 309 aaPredicted RBP11.5□□□□□ -0.57
ABCD3-201ENST00000315713 SLC13A3Q8WWT9 602 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 SNRNP40Q96DI7 357 aaKnown RBP11.5□□□□□ -0.57
ABCD3-201ENST00000315713 C10orf90Q96M02 699 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 GPR78Q96P69 363 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 SMAD5Q99717 465 aaKnown RBP11.5□□□□□ -0.57
ABCD3-201ENST00000315713 MACROD1Q9BQ69 325 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 YIPF2Q9BWQ6 316 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 PARD6BQ9BYG5 372 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 DRC3Q9H069 523 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 SPNS1Q9H2V7 528 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 ZNF304Q9HCX3 659 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 PRM3Q9NNZ6 103 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 ASF1BQ9NVP2 202 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 XPR1Q9UBH6 696 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 OPTCQ9UBM4 332 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 CDC14AQ9UNH5 594 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 ANGPTL3Q9Y5C1 460 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 APCP25054 2843 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 C2CD3Q4AC94 2353 aa11.5□□□□□ -0.57
ABCD3-201ENST00000315713 PKDREJQ9NTG1 2253 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 CPAMD8Q8IZJ3 1885 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 SCN2AQ99250 2005 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 GOLGA8RI6L899 631 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 K7EPI3 171 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 PRPF4O43172 522 aaKnown RBP eCLIP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 NDUFS4O43181 175 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 SMIM24O75264 130 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 MTHFD2P13995 350 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 KRT15P19012 456 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 FBLP22087 321 aaKnown RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 OTX2P32243 289 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 SCTRP47872 440 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 AVPR1BP47901 424 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 ALDH18A1P54886 795 aaKnown RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 RRADP55042 308 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 RGS1Q08116 209 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 IFFO1Q0D2I5 559 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 SLBPQ14493 270 aaKnown RBP eCLIP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 SETDB1Q15047 1291 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 PLEKHN1Q494U1 663 aaPredicted RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 XKR6Q5GH73 641 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 ATG9BQ674R7 924 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 SLCO4C1Q6ZQN7 724 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 MED25Q71SY5 747 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 MRGPREQ86SM8 312 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 HPS6Q86YV9 775 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 KRT78Q8N1N4 520 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 TMEM102Q8N9M5 508 aaPredicted RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 ZNF740Q8NDX6 193 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 ZCCHC10Q8TBK6 192 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 EPS8L3Q8TE67 593 aaKnown RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 UBTD2Q8WUN7 234 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 FKBP10Q96AY3 582 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 MVB12AQ96EY5 273 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 MMABQ96EY8 250 aaPredicted RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 MRPL57Q9BQC6 102 aaKnown RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 SARGQ9BW04 601 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 ZFP69BQ9UJL9 534 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 TMCO1Q9UM00 188 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 PTRH2Q9Y3E5 179 aaKnown RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 ASB1Q9Y576 335 aa11.49□□□□□ -0.57
ABCD3-201ENST00000315713 ANKRD17O75179 2603 aaKnown RBP11.49□□□□□ -0.57
ABCD3-201ENST00000315713 CACNA1CQ13936 2221 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 F8P00451 2351 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 CELSR1Q9NYQ6 3014 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 A0A0A6YYC8 382 aaPredicted RBP11.48□□□□□ -0.57
ABCD3-201ENST00000315713 TLDC2A0PJX2 215 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 WIPF3A6NGB9 483 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 I3L1I5 382 aaPredicted RBP11.48□□□□□ -0.57
ABCD3-201ENST00000315713 CDH16O75309 829 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 ALBP02768 609 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 PYGBP11216 843 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 EPB42P16452 691 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 ITGAXP20702 1163 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 AHRP35869 848 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 IRF8Q02556 426 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 OCA2Q04671 838 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 CHIT1Q13231 466 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 FAM53BQ14153 422 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 HIST2H2ACQ16777 129 aaPredicted RBP11.48□□□□□ -0.57
ABCD3-201ENST00000315713 PAGE2BQ5JRK9 111 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 HIST2H2AA3Q6FI13 130 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 MRPL14Q6P1L8 145 aaKnown RBP11.48□□□□□ -0.57
ABCD3-201ENST00000315713 TMIGD1Q6UXZ0 262 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 COX15Q7KZN9 410 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 OVCH1Q7RTY7 1134 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 RAB43Q86YS6 212 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 IQCKQ8N0W5 287 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 CISD2Q8N5K1 135 aaKnown RBP11.48□□□□□ -0.57
ABCD3-201ENST00000315713 TEX9Q8N6V9 391 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 PTGR2Q8N8N7 351 aaPredicted RBP11.48□□□□□ -0.57
ABCD3-201ENST00000315713 KCT2Q8NC54 265 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 ACMSDQ8TDX5 336 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 CCT6BQ92526 530 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 CAVIN3Q969G5 261 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 TM4SF19Q96DZ7 209 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 PHF21BQ96EK2 531 aa11.48□□□□□ -0.57
ABCD3-201ENST00000315713 PTCD3Q96EY7 689 aaKnown RBP11.48□□□□□ -0.57
ABCD3-201ENST00000315713 C5orf34Q96MH7 638 aa11.48□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms