RNA–Protein interactions for RNA: ENST00000264555.9

PHRF1-201, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PHRF1, Length 5,523 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-201ENST00000264555 SMAD6O43541 496 aaKnown RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 PAK4O96013 591 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 STATHP02808 62 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 GGT1P19440 569 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 IGFALSP35858 605 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 FOXA1P55317 472 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 MXD1Q05195 221 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 GPR68Q15743 365 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 DDI2Q5TDH0 399 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 LCN1P1Q5VSP4 162 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 TSTD1Q8NFU3 115 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 ZNF420Q8TAQ5 688 aaPredicted RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 NR4A3Q92570 626 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 ISG20Q96AZ6 181 aaKnown RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 PHF12Q96QT6 1004 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 C17orf62Q9BQA9 187 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 ZNF696Q9H7X3 374 aa16.14■□□□□ 0.17
PHRF1-201ENST00000264555 TRNAU1APQ9NX07 287 aaKnown RBP16.14■□□□□ 0.17
PHRF1-201ENST00000264555 BMP2P12643 396 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 CD9P21926 228 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 ZNF33BQ06732 778 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 LAPTM4AQ15012 233 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 TYSND1Q2T9J0 566 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 BICRALQ6AI39 1079 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 POMZP3Q6PJE2 187 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 CLEC14AQ86T13 490 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 DOHHQ9BU89 302 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 ABCB9Q9NP78 766 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 CFL2Q9Y281 166 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 PCDHGA2Q9Y5H1 932 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 HEPACAM2A8MVW5 462 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 TFECO14948 347 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-201ENST00000264555 SHMT2P34897 504 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 GRK6P43250 576 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 PGDP52209 483 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 BNIP3Q12983 259 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 LARP4Q71RC2 724 aaKnown RBP eCLIP16.13■□□□□ 0.17
PHRF1-201ENST00000264555 C12orf76Q8N812 135 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-201ENST00000264555 NEK6Q9HC98 313 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 TNFRSF21O75509 655 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 C6P13671 934 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 HOXC13P31276 330 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 ST3GAL3Q11203 375 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 LRRC17Q8N6Y2 441 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 FBXO15Q8NCQ5 510 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-201ENST00000264555 OR10H4Q8NGA5 316 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 BADQ92934 168 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 FBXL8Q96CD0 374 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 OR51V1Q9H2C8 321 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 TBC1D17Q9HA65 648 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 IDH3BO43837 385 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 KHDRBS3O75525 346 aaKnown RBP16.13■□□□□ 0.17
PHRF1-201ENST00000264555 IL3P08700 152 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 TFPIP10646 304 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 GPX3P22352 226 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 KCNA5P22460 613 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 OMPP47874 163 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 RORCP51449 518 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 KRT74Q7RTS7 529 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 AVL9Q8NBF6 648 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 BHLHE41Q9C0J9 482 aaPredicted RBP16.13■□□□□ 0.17
PHRF1-201ENST00000264555 RDH14Q9HBH5 336 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 ARMC1Q9NVT9 282 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 TAS2R7Q9NYW3 318 aa16.13■□□□□ 0.17
PHRF1-201ENST00000264555 MROH6A6NGR9 719 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 CSNK1DP48730 415 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 NXPE4Q6UWF7 544 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 IQCHQ86VS3 1027 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 HUS1BQ8NHY5 278 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 FATE1Q969F0 183 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 MOAP1Q96BY2 351 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 GAL3ST4Q96RP7 486 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 KCNS3Q9BQ31 491 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 C20orf27Q9GZN8 174 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 LYARQ9NX58 379 aaKnown RBP16.12■□□□□ 0.17
PHRF1-201ENST00000264555 TMEM181Q9P2C4 612 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 COPS7AQ9UBW8 275 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 RGS17Q9UGC6 210 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-201ENST00000264555 FAM240BA0A1B0GVZ2 78 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 VEGFBP49765 207 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 RNF38Q9H0F5 515 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 MKKSQ9NPJ1 570 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-201ENST00000264555 UBE2QL1A1L167 161 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 SSNA1O43805 119 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 HRH2P25021 359 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 GRIA2P42262 883 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 NUDT6P53370 316 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 NADSYN1Q6IA69 706 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 RAB43Q86YS6 212 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 COQ7Q99807 217 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 P2RY13Q9BPV8 354 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 H7C0S8 307 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 PLOD3O60568 738 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 MGAT3Q09327 533 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 TEX26Q8N6G2 289 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 C5orf34Q96MH7 638 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 SNTG1Q9NSN8 517 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 MGAT4BQ9UQ53 548 aa16.12■□□□□ 0.17
PHRF1-201ENST00000264555 SPIN1Q9Y657 262 aaPredicted RBP16.12■□□□□ 0.17
PHRF1-201ENST00000264555 GRXCR2A6NFK2 248 aa16.11■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms