RNA–Protein interactions for RNA: ENST00000261556.10

TMEM260-201, Transcript of transmembrane protein 260, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM260, Length 4,264 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-201ENST00000261556 PCDHGA6Q9Y5G7 932 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 CASZ1Q86V15 1759 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 ARID1AO14497 2285 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 ANKRD26Q9UPS8 1709 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 CA12O43570 354 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 SPDEFO95238 335 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 TCF3P15923 654 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 UFM1P61960 85 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 GRB7Q14451 532 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 TCEAL1Q15170 157 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 TUSC1Q2TAM9 212 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 PRAMEF13Q5VWM6 474 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 DPY19L2P1Q6NXN4 242 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 LRFN4Q6PJG9 635 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 GPALPP1Q8IXQ4 340 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 KCNA7Q96RP8 456 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 ZCCHC2Q9C0B9 1178 aaKnown RBP12.57□□□□□ -0.4
TMEM260-201ENST00000261556 IL22Q9GZX6 179 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 RHOJQ9H4E5 214 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 DNMT3BQ9UBC3 853 aaKnown RBP12.57□□□□□ -0.4
TMEM260-201ENST00000261556 PIK3C2AO00443 1686 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 ARVCFO00192 962 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 MMP20O60882 483 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 LTA4HP09960 611 aaKnown RBP12.57□□□□□ -0.4
TMEM260-201ENST00000261556 MAPK1P28482 360 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 CSTF2P33240 577 aaKnown RBP eCLIP12.57□□□□□ -0.4
TMEM260-201ENST00000261556 GPR50Q13585 617 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 SEC23BQ15437 767 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 ENTHD1Q8IYW4 607 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 PDZD7Q9H5P4 517 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 SLIT3O75094 1523 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 OR6C75A6NL08 312 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 SIGLEC5O15389 551 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 UGT2B17O75795 530 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 DRD5P21918 477 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 SIGLEC14Q08ET2 396 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 CRHR2Q13324 411 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 LRRC32Q14392 662 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 COL28A1Q2UY09 1125 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 USP30Q70CQ3 517 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 PRSS48Q7RTY5 328 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 CYP4Z1Q86W10 505 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 ZC3H3Q8IXZ2 948 aaKnown RBP12.57□□□□□ -0.4
TMEM260-201ENST00000261556 ESAMQ96AP7 390 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 CPNE2Q96FN4 548 aaPredicted RBP12.57□□□□□ -0.4
TMEM260-201ENST00000261556 COL21A1Q96P44 957 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 TBC1D17Q9HA65 648 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 MIOSQ9NXC5 875 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 MIOXQ9UGB7 285 aa12.57□□□□□ -0.4
TMEM260-201ENST00000261556 COL1A2P08123 1366 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 ZNF705EA8MWA4 302 aaPredicted RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 M0R129 80 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 STX16O14662 325 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PCDHGA12O60330 932 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 TBL1XO60907 577 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PTP4A3O75365 173 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 CD2P06729 351 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 HEXBP07686 556 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 RETP07949 1114 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 ADRA1BP35368 520 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 CCL14Q16627 93 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 UNC5DQ6UXZ4 953 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 TMC8Q8IU68 726 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PUM2Q8TB72 1066 aaKnown RBP eCLIP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 GTPBP3Q969Y2 492 aaKnown RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 MYO19Q96H55 970 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 ASB8Q9H765 288 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 SLC28A3Q9HAS3 691 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 CACNA1FO60840 1977 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 MYO5AQ9Y4I1 1855 aaKnown RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 A0A1B0GVC2 190 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 SLC35F4A4IF30 521 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 A6NIN4 97 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 MDM4O15151 490 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 RP2O75695 350 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 CCNDBP1O95273 360 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PAPSS2O95340 614 aaPredicted RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 C4BPAP04003 597 aaKnown RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 CD9P21926 228 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 WARSP23381 471 aaKnown RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 S100PP25815 95 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 APEX1P27695 318 aaKnown RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PTPN6P29350 595 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 EEFSECP57772 596 aaKnown RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 INCA1Q0VD86 236 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PTCHD3Q3KNS1 767 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 LCLAT1Q6UWP7 414 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 CASP12Q6UXS9 341 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 CFAP52Q8N1V2 620 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 STK40Q8N2I9 435 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 ZNF670Q9BS34 389 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PCDHB9Q9Y5E1 797 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 RHPN2P1A8MT19 583 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 LINC01387J3KSC0 135 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 SMAD9O15198 467 aaKnown RBP12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PREPP48147 710 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 ZNF124Q15973 351 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 PCID2Q5JVF3 399 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 LIPKQ5VXJ0 399 aa12.56□□□□□ -0.4
TMEM260-201ENST00000261556 RAB12Q6IQ22 244 aa12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms