RNA–Protein interactions for RNA: ENST00000221232.9

CNOT3-201, Transcript of CCR4-NOT transcription complex subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNOT3, Length 2,852 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT3-201ENST00000221232 SLC5A10A0PJK1 596 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 FUOMA2VDF0 154 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 TMEM229AB2RXF0 380 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 H0YIV9 168 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 ZNF197O14709 1029 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 MMP20O60882 483 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 CD36P16671 472 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 CHI3L1P36222 383 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 HPCAL1P37235 193 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 VEGFBP49765 207 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 ST13P50502 369 aaKnown RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 RPS26P62854 115 aaKnown RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 DNASE1L3Q13609 305 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 SOWAHCQ53LP3 525 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 ZNF805Q5CZA5 627 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 RAET1GQ6H3X3 334 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 FAM124AQ86V42 546 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 ATL1Q8WXF7 558 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 LRRC3BQ96PB8 259 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 NIPSNAP1Q9BPW8 284 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 RAD18Q9NS91 495 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 NDUFAF4Q9P032 175 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 C5AR2Q9P296 337 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 PLXNB3Q9ULL4 1909 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 C1orf226A1L170 272 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 CLDN25C9JDP6 229 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 RTCAO00442 366 aaKnown RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 C1orf105O95561 183 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 TIA1P31483 386 aaKnown RBP eCLIP14.05□□□□□ -0.163e-10■□□□□ 10.6
CNOT3-201ENST00000221232 IL18R1Q13478 541 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 NFE2L1Q14494 772 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 TRIM16LQ309B1 348 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 UAP1L1Q3KQV9 507 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 IQCCQ4KMZ1 466 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 TECPR1Q7Z6L1 1165 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 TSPYL5Q86VY4 417 aaPredicted RBP14.05□□□□□ -0.16
CNOT3-201ENST00000221232 C12orf40Q86WS4 652 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 C11orf65Q8NCR3 313 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 APH1BQ8WW43 257 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 DOHHQ9BU89 302 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 RAB23Q9ULC3 237 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 RNF6Q9Y252 685 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 ERGIC3Q9Y282 383 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 PCDHGA6Q9Y5G7 932 aa14.05□□□□□ -0.16
CNOT3-201ENST00000221232 GNRH1P01148 92 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 SEMG1P04279 462 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 POU1F1P28069 291 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 MNX1P50219 401 aaPredicted RBP14.04□□□□□ -0.16
CNOT3-201ENST00000221232 ITGA1P56199 1179 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 KEAP1Q14145 624 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 INAQ16352 499 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 C11orf24Q96F05 449 aaPredicted RBP14.04□□□□□ -0.16
CNOT3-201ENST00000221232 ROGDIQ9GZN7 287 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 RNF167Q9H6Y7 350 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 PCYT1BQ9Y5K3 369 aaPredicted RBP14.04□□□□□ -0.16
CNOT3-201ENST00000221232 PMF1-BGLAPU3KQ54 211 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 PRAMEF25A6NGN4 478 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 AP2A2O94973 939 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 HSMCR30P0CW71 290 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 IFITM3Q01628 133 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 LRRC74AQ0VAA2 488 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 MPEG1Q2M385 716 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 EXOC3L2Q2M3D2 409 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 OR56A3Q8NH54 315 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 FBLIM1Q8WUP2 373 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 FCRL1Q96LA6 429 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 COPS4Q9BT78 406 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 EPS8L2Q9H6S3 715 aa14.04□□□□□ -0.16
CNOT3-201ENST00000221232 COL4A6Q14031 1691 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 TRIM43BA6NCK2 446 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 FAM227AF5H4B4 570 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 PCDH17O14917 1159 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 CLTBP09497 229 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 EPCAMP16422 314 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 ZNF12P17014 697 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 MAGP20916 626 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 PPM1AP35813 382 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 SLC19A1P41440 591 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 ASMTP46597 345 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 ALDH9A1P49189 494 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 PRLHRP49683 370 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 CRISP3P54108 245 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 SELENOWP63302 87 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 PPIGQ13427 754 aaKnown RBP eCLIP14.03□□□□□ -0.161e-6■■■□□ 14.8
CNOT3-201ENST00000221232 SCARB2Q14108 478 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 SLC5A12Q1EHB4 618 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 ERAP2Q6P179 960 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 PLD3Q8IV08 490 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 TRIM43Q96BQ3 446 aaPredicted RBP14.03□□□□□ -0.16
CNOT3-201ENST00000221232 TAMM41Q96BW9 452 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 PPCDCQ96CD2 204 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 LGALS12Q96DT0 336 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 ZNF347Q96SE7 839 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 GABARAPL1Q9H0R8 117 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 ZBTB20Q9HC78 741 aaPredicted RBP14.03□□□□□ -0.16
CNOT3-201ENST00000221232 GPR83Q9NYM4 423 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 TAS2R16Q9NYV7 291 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 NAALAD2Q9Y3Q0 740 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 DYRK1BQ9Y463 629 aa14.03□□□□□ -0.16
CNOT3-201ENST00000221232 PCDHGB3Q9Y5G1 929 aa14.03□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms