RNA–Protein interactions for RNA: ENST00000057513.7

TNIP3-201, Transcript of TNFAIP3 interacting protein 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TNIP3, Length 2,416 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNIP3-201ENST00000057513 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP13.19□□□□□ -0.3
TNIP3-201ENST00000057513 LSM2Q9Y333 95 aaKnown RBP13.19□□□□□ -0.3
TNIP3-201ENST00000057513 ALPK3Q96L96 1907 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 TEX51A0A1B0GUA7 166 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 ARL5CA6NH57 179 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 DRGXA6NNA5 263 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 SCN2BO60939 215 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 CLEC2LP0C7M8 214 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 PCDH1Q08174 1060 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 MTAPQ13126 283 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 DUSP28Q4G0W2 176 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 GDPGP1Q6ZNW5 385 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 ABI3BPQ7Z7G0 1075 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 BBS7Q8IWZ6 715 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 ESX1Q8N693 406 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 CREB3L4Q8TEY5 395 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 SLC29A3Q9BZD2 475 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 TPT1P8Q9HAU6 139 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 MCUBQ9NWR8 336 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 ING3Q9NXR8 418 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 B3GNT2Q9NY97 397 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 GLTPQ9NZD2 209 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 COQ3Q9NZJ6 369 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 SEC14L4Q9UDX3 406 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 STUB1Q9UNE7 303 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 MAPRE3Q9UPY8 281 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 CLCA3PQ9Y6N3 262 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 PLXNA4Q9HCM2 1894 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 SH3D21A4FU49 640 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 NFKBIEO00221 500 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 PLD2O14939 933 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 INSIG1O15503 277 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 TSC22D2O75157 780 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 CSO75390 466 aaKnown RBP13.18□□□□□ -0.3
TNIP3-201ENST00000057513 GCM2O75603 506 aaPredicted RBP13.18□□□□□ -0.3
TNIP3-201ENST00000057513 PDE9AO76083 593 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 OR4Q2P0C623 313 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 ACADMP11310 421 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 HLA-EP13747 358 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 EPORP19235 508 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 DGKEP52429 567 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 RHAGQ02094 409 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 ABRQ12979 859 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 HNRNPA0Q13151 305 aaKnown RBP13.18□□□□□ -0.3
TNIP3-201ENST00000057513 ARHGEF7Q14155 803 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 UGT8Q16880 541 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 MSANTD1Q6ZTZ1 278 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 CFAP52Q8N1V2 620 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 OR7D4Q8NG98 312 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 LRRC20Q8TCA0 184 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 SLC25A46Q96AG3 418 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 CINPQ9BW66 212 aaPredicted RBP13.18□□□□□ -0.3
TNIP3-201ENST00000057513 BOCQ9BWV1 1114 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 CLN6Q9NWW5 311 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 EIF3KQ9UBQ5 218 aaKnown RBP13.18□□□□□ -0.3
TNIP3-201ENST00000057513 NUP50Q9UKX7 468 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 FZD4Q9ULV1 537 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 NDRG2Q9UN36 371 aaKnown RBP13.18□□□□□ -0.3
TNIP3-201ENST00000057513 HCN4Q9Y3Q4 1203 aa13.18□□□□□ -0.3
TNIP3-201ENST00000057513 DNMT3AQ9Y6K1 912 aaPredicted RBP13.18□□□□□ -0.3
TNIP3-201ENST00000057513 HYKKA2RU49 373 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 OR5K3A6NET4 321 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 YY2O15391 372 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 TRIM3O75382 744 aaPredicted RBP13.17□□□□□ -0.3
TNIP3-201ENST00000057513 STK16O75716 305 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 CTPS1P17812 591 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 DDX5P17844 614 aaKnown RBP13.17□□□□□ -0.3
TNIP3-201ENST00000057513 ITGB7P26010 798 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 HOXD9P28356 352 aaPredicted RBP13.17□□□□□ -0.3
TNIP3-201ENST00000057513 MAP2K3P46734 347 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 RGS4P49798 205 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 CRYBB1P53674 252 aaPredicted RBP13.17□□□□□ -0.3
TNIP3-201ENST00000057513 SPHARQ15513 63 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 EEF1AKMT2Q5JPI9 291 aaKnown RBP13.17□□□□□ -0.3
TNIP3-201ENST00000057513 LCN1P1Q5VSP4 162 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 MON1AQ86VX9 555 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 FAM9CQ8IZT9 166 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 SLC34A3Q8N130 599 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 STK40Q8N2I9 435 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 ATP6V1C2Q8NEY4 427 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 OR8H1Q8NGG4 311 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 MSLNLQ96KJ4 702 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 B3GNT4Q9C0J1 378 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 MCOLN1Q9GZU1 580 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 ELOVL6Q9H5J4 265 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 TRIM45Q9H8W5 580 aaPredicted RBP13.17□□□□□ -0.3
TNIP3-201ENST00000057513 PLEKHB1Q9UF11 243 aaPredicted RBP13.17□□□□□ -0.3
TNIP3-201ENST00000057513 SMIM30A4D0T7 59 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 ANKRD66B4E2M5 251 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 AP2A2O94973 939 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 PDGFAP04085 211 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 SRCP12931 536 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 MAPK1P28482 360 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 CNR2P34972 360 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 PTGS2P35354 604 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 MAN2A2P49641 1150 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 SELENOWP63302 87 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 TAGLNQ01995 201 aaKnown RBP13.17□□□□□ -0.3
TNIP3-201ENST00000057513 HSPA14Q0VDF9 509 aa13.17□□□□□ -0.3
TNIP3-201ENST00000057513 NOXRED1Q6NXP6 359 aa13.17□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms