RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 Lancl3Q8CD19 420 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Galnt18Q8K1B9 622 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Med27Q9DB40 311 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Isca2Q9DCB8 154 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Noa1Q9JJG9 693 aaKnown RBP11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc22a4Q9Z306 553 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fam43bA2AM80 330 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 9630041A04RikD3Z3U4 205 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pcyt1aP49586 367 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pold1P52431 1105 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm5416Q6IE28 97 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Smco1Q8CEZ1 214 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tmem203Q8R235 136 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr826Q8VFU6 313 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr825Q8VFU7 320 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Asb4Q9WV71 426 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 B4galt2Q9Z2Y2 369 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 NagluO88325 739 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zfp14P10755 501 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Hnrnpa1P49312 320 aaKnown RBP11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gal3st3P61315 431 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 AbatP61922 500 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Nxf3Q4ZGD9 553 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 CishQ62225 257 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vmn1r185Q8R299 319 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 EtfaQ99LC5 333 aaKnown RBP11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Atp5f1Q9CQQ7 256 aaKnown RBP11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Senp8Q9D2Z4 221 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr671A0A1B0GSN5 317 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zfp949E9Q732 603 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm4775F7ANJ3 135 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Capn5O08688 640 aaKnown RBP11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pgam2O70250 253 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 DtlQ3TLR7 729 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Taar7dQ5QD10 358 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mep1bQ61847 704 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 AjubaQ91XC0 547 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc26a5Q99NH7 744 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Eral1Q9CZU4 437 aaKnown RBP11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tex44Q9DA60 530 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Csnk1dQ9DC28 415 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Mettl15Q9DCL4 406 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dusp13Q9QYJ7 198 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Adam17Q9Z0F8 827 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm4969D3YZT1 566 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tex16F6WNY1 1150 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Vmn2r13L7N1X2 831 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fut10Q5F2L2 481 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 CapslQ6P8Y1 208 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 TufmQ8BFR5 452 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Cox14Q8BH51 57 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Hspa13Q8BM72 471 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Sec22cQ8BXT9 303 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Bpifb2Q8C1E1 462 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Teddm1bQ8CC62 306 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 SelenosQ9BCZ4 190 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rsph14Q9D3W1 341 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Wdr83Q9DAJ4 315 aaKnown RBP11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Psmg2Q9EST4 264 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Acot2Q9QYR9 453 aa11.48□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fam71dD3YV92 440 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Npc1O35604 1277 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Apoa2P09813 102 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Ca3P16015 260 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Lrrn4P59383 733 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gnb5P62881 395 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fbxo40P62932 710 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Xkr5Q5GH66 676 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 C8bQ8BH35 589 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 CcinQ8CDE2 588 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 MepceQ8K3A9 666 aaKnown RBP11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Adam21Q9JI76 729 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Nrxn2E9Q7X7 1710 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Adh6bA0A1D5RMB0 384 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Arl9F7BE40 171 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Esr1P19785 599 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Pex2P55098 305 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Glb1l2Q3UPY5 636 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dnaaf3Q3UYV8 586 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tmem247Q497K7 211 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr381Q5SSP0 311 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Slc25a23Q6GQS1 467 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm5346Q7M766 736 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr684Q7TRN8 312 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Serpina3fQ80X76 445 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Dtd2Q8BHA3 168 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Lrch3Q8BVU0 778 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rell1Q8K2J7 272 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Olfr1484Q8VEU6 315 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Tomm20lQ9D4V6 152 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zfp600A2A7V0 737 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fam131cA2ADB2 273 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Gm7535F7CXE4 302 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Rad51dO55230 329 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Zp2P20239 713 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Apobec1P51908 229 aaKnown RBP11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fbp2P70695 339 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Syndig1lQ3USQ7 237 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Prss53Q571E5 552 aa11.47□□□□□ -0.57
Pcif1-201ENSMUST00000041643 Fam71bQ5STT6 665 aa11.47□□□□□ -0.57
Retrieved 100 of 22,080 RNA–protein pairs in 27.4 ms