RNA–Protein interactions for RNA: YMR314W

PRE5, Transcript of Alpha 6 subunit of the 20S proteasome, yeastyeast

Gene PRE5, Length 705 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (RIP-Chip)
Gene Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score Detected Interaction
PRE5YMR314W MNL2Q12205 849 aa8.55□□□□□ -1.04
PRE5YMR314W PCD1Q12524 340 aa8.55□□□□□ -1.04
PRE5YMR314W YOR111WQ99210 232 aa8.55□□□□□ -1.04
PRE5YMR314W PGK1P00560 416 aaKnown RBP8.54□□□□□ -1.04
PRE5YMR314W RNR3P21672 869 aaKnown RBP8.54□□□□□ -1.04
PRE5YMR314W EFT1P32324 842 aaKnown RBP8.54□□□□□ -1.04
PRE5YMR314W YKL097CP34245 136 aa8.54□□□□□ -1.04
PRE5YMR314W UBX7P38349 436 aa8.54□□□□□ -1.04
PRE5YMR314W PEX28P38848 579 aa8.54□□□□□ -1.04
PRE5YMR314W YHR202WP38887 602 aa8.54□□□□□ -1.04
PRE5YMR314W ORC4P54791 529 aa8.54□□□□□ -1.04
PRE5YMR314W RIM20Q12033 661 aa8.54□□□□□ -1.04
PRE5YMR314W RRD2Q12461 358 aa8.54□□□□□ -1.04
PRE5YMR314W LAA1P39526 2014 aa8.53□□□□□ -1.04
PRE5YMR314W MFB1Q04922 465 aa8.53□□□□□ -1.04
PRE5YMR314W YLR257WQ06146 321 aaKnown RBP8.53□□□□□ -1.04
PRE5YMR314W HIF1Q12373 385 aa8.53□□□□□ -1.04
PRE5YMR314W KTR4P38131 464 aa8.52□□□□□ -1.05
PRE5YMR314W RIM4P38741 713 aa8.52□□□□□ -1.05
PRE5YMR314W YIR016WP40572 265 aa8.52□□□□□ -1.05
PRE5YMR314W ACF4P47129 309 aa8.52□□□□□ -1.05
PRE5YMR314W EST2Q06163 884 aa8.52□□□□□ -1.05
PRE5YMR314W MRN1Q08925 612 aaKnown RBP RIP-Chip data8.52□□□□□ -1.05not detected
PRE5YMR314W HFI1Q12060 488 aa8.52□□□□□ -1.05
PRE5YMR314W CIT1P00890 479 aa8.51□□□□□ -1.05
PRE5YMR314W ADE2P21264 571 aaKnown RBP8.51□□□□□ -1.05
PRE5YMR314W ESS1P22696 170 aa8.51□□□□□ -1.05
PRE5YMR314W HCM1P25364 564 aa8.51□□□□□ -1.05
PRE5YMR314W CCT3P39077 534 aaKnown RBP8.51□□□□□ -1.05
PRE5YMR314W CNM67P53865 581 aaKnown RBP8.51□□□□□ -1.05
PRE5YMR314W SPP1Q03012 353 aa8.51□□□□□ -1.05
PRE5YMR314W TRP2P00899 507 aaKnown RBP8.5□□□□□ -1.05
PRE5YMR314W WHI2P12611 486 aa8.5□□□□□ -1.05
PRE5YMR314W CDC48P25694 835 aaKnown RBP8.5□□□□□ -1.05
PRE5YMR314W IMP2'P32351 346 aa8.5□□□□□ -1.05
PRE5YMR314W PTC4P38089 393 aa8.5□□□□□ -1.05
PRE5YMR314W MAF1P41910 395 aa8.5□□□□□ -1.05
PRE5YMR314W JJJ3P47138 172 aa8.5□□□□□ -1.05
PRE5YMR314W MRI1Q06489 411 aaKnown RBP8.5□□□□□ -1.05
PRE5YMR314W TPM1P17536 199 aaKnown RBP8.49□□□□□ -1.05
PRE5YMR314W PEX1P24004 1043 aa8.49□□□□□ -1.05
PRE5YMR314W SRO9P25567 434 aaKnown RBP8.49□□□□□ -1.05
PRE5YMR314W BIO2P32451 375 aa8.49□□□□□ -1.05
PRE5YMR314W CCL1P37366 393 aa8.49□□□□□ -1.05
PRE5YMR314W AAP1P37898 856 aaKnown RBP8.49□□□□□ -1.05
PRE5YMR314W MGA2P40578 1113 aa8.49□□□□□ -1.05
PRE5YMR314W GPD2P41911 440 aaKnown RBP8.49□□□□□ -1.05
PRE5YMR314W YDR341CQ05506 607 aaKnown RBP8.49□□□□□ -1.05
PRE5YMR314W CSE2P33308 149 aa8.48□□□□□ -1.05
PRE5YMR314W PML39Q03760 334 aa8.48□□□□□ -1.05
PRE5YMR314W NKP2Q06162 153 aa8.48□□□□□ -1.05
PRE5YMR314W DED1P06634 604 aaKnown RBP8.47□□□□□ -1.05
PRE5YMR314W PEP3P27801 918 aa8.47□□□□□ -1.05
PRE5YMR314W PGM1P33401 570 aaKnown RBP8.47□□□□□ -1.05
PRE5YMR314W GCS1P35197 352 aa8.47□□□□□ -1.05
PRE5YMR314W XDJ1P39102 459 aa8.47□□□□□ -1.05
PRE5YMR314W EAF5P39995 279 aa8.47□□□□□ -1.05
PRE5YMR314W DOT1Q04089 582 aaKnown RBP8.47□□□□□ -1.05
PRE5YMR314W COQ9Q05779 260 aa8.47□□□□□ -1.05
PRE5YMR314W SMC5Q08204 1093 aa8.47□□□□□ -1.05
PRE5YMR314W STB3Q12427 513 aa8.47□□□□□ -1.05
PRE5YMR314W RPS9AO13516 197 aaKnown RBP8.46□□□□□ -1.06
PRE5YMR314W HIS5P07172 385 aa8.46□□□□□ -1.06
PRE5YMR314W COY1P34237 679 aa8.46□□□□□ -1.06
PRE5YMR314W SEG2P34250 1132 aa8.46□□□□□ -1.06
PRE5YMR314W CIC1P38779 376 aaKnown RBP8.46□□□□□ -1.06
PRE5YMR314W YEL023CP39992 682 aa8.46□□□□□ -1.06
PRE5YMR314W VID28P40547 921 aa8.46□□□□□ -1.06
PRE5YMR314W LAM5P43560 674 aa8.46□□□□□ -1.06
PRE5YMR314W FPR4Q06205 392 aaPredicted RBP8.46□□□□□ -1.06
PRE5YMR314W YOR022CQ12204 715 aa8.46□□□□□ -1.06
PRE5YMR314W HMG2P12684 1045 aa8.45□□□□□ -1.06
PRE5YMR314W STI1P15705 589 aaKnown RBP RIP-Chip data8.45□□□□□ -1.06not detected
PRE5YMR314W MAK11P20484 414 aaKnown RBP8.45□□□□□ -1.06
PRE5YMR314W RAM1P22007 431 aa8.45□□□□□ -1.06
PRE5YMR314W RXT2P38255 430 aa8.45□□□□□ -1.06
PRE5YMR314W LSB6P42951 607 aa8.45□□□□□ -1.06
PRE5YMR314W YGR273CP53329 174 aa8.45□□□□□ -1.06
PRE5YMR314W BNI5P53890 448 aaKnown RBP8.45□□□□□ -1.06
PRE5YMR314W MET6P05694 767 aaKnown RBP8.44□□□□□ -1.06
PRE5YMR314W VAS1P07806 1104 aaKnown RBP8.44□□□□□ -1.06
PRE5YMR314W SPE1P08432 466 aa8.44□□□□□ -1.06
PRE5YMR314W TMT1P32643 299 aa8.44□□□□□ -1.06
PRE5YMR314W SAS3P34218 831 aa8.44□□□□□ -1.06
PRE5YMR314W AIM33Q04516 312 aa8.44□□□□□ -1.06
PRE5YMR314W YML083CQ04526 418 aa8.44□□□□□ -1.06
PRE5YMR314W PEX19Q07418 342 aa8.44□□□□□ -1.06
PRE5YMR314W RLF2Q12495 606 aa8.44□□□□□ -1.06
PRE5YMR314W RAD27P26793 382 aa8.43□□□□□ -1.06
PRE5YMR314W FIS1P40515 155 aa8.43□□□□□ -1.06
PRE5YMR314W ROD1Q02805 837 aa8.43□□□□□ -1.06
PRE5YMR314W NSE1Q07913 336 aa8.43□□□□□ -1.06
PRE5YMR314W PKH2Q12236 1081 aaKnown RBP8.43□□□□□ -1.06
PRE5YMR314W ILV1P00927 576 aaKnown RBP8.42□□□□□ -1.06
PRE5YMR314W CLN3P13365 580 aa8.42□□□□□ -1.06
PRE5YMR314W GLN3P18494 730 aa8.42□□□□□ -1.06
PRE5YMR314W RSA4P25382 515 aaKnown RBP8.42□□□□□ -1.06
PRE5YMR314W CAF120P53836 1060 aa8.42□□□□□ -1.06
PRE5YMR314W MFM1Q02783 413 aa8.42□□□□□ -1.06
PRE5YMR314W LEE1Q02799 301 aaKnown RBP8.42□□□□□ -1.06
Retrieved 100 of 5,963 RNA–protein pairs in 29.2 ms